Lates calcarifer (barramundi perch): 108880694
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Entry
108880694 CDS
T04895
Symbol
tubb5
Name
(RefSeq) tubulin beta-5 chain isoform X1
KO
K07375
tubulin beta
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04145
Phagosome
lcf04540
Gap junction
lcf04814
Motor proteins
lcf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108880694 (tubb5)
09144 Cellular community - eukaryotes
04540 Gap junction
108880694 (tubb5)
09142 Cell motility
04814 Motor proteins
108880694 (tubb5)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108880694 (tubb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108880694 (tubb5)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108880694 (tubb5)
04147 Exosome [BR:
lcf04147
]
108880694 (tubb5)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
108880694 (tubb5)
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
108880694 (tubb5)
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108880694 (tubb5)
Exosomal proteins of colorectal cancer cells
108880694 (tubb5)
Exosomal proteins of bladder cancer cells
108880694 (tubb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_2
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
108880694
NCBI-ProteinID:
XP_018527848
LinkDB
All DBs
Position
LG15:complement(9801171..9805877)
Genome browser
AA seq
444 aa
AA seq
DB search
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEAEEDA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaatcgtacacatccaggccggtcagtgcggtaaccagattggtgccaagttc
tgggaagtgatcagtgacgagcatggcatcgatcccacgggaacttaccacggagacagc
gacctgcagctcgacaggatcagtgtttactataatgaggccacaggaggtaaatatgtg
cctcgggccattctggtggacttggagcctggcaccatggactctgtgaggtctggacct
tttgggcagatcttcagacctgacaattttgtgtttggtcagagcggtgctggaaacaac
tgggccaagggtcactacacagagggagctgagttggtggactcagtcctggatgtggtc
cgcaaagagtcagaaagctgtgactgcctgcagggcttccagctcacccactctcttggt
ggtggaactggatccggaatgggaaccctgctcatcagcaagatccgtgaggagtacccc
gaccgtatcatgaacaccttcagtgtggtgccttcccccaaggtgtctgacacagtggtt
gagccttacaatgccaccctgtcagtccaccagctcgtagagaacacagatgaaacctac
tgcattgacaacgaagctctgtacgacatctgcttccgcactctcaaactgaccacaccc
acctacggagaccttaaccacctggtgtctgctaccatgagcggggtcaccacctgcctg
cgcttccctggtcagctcaatgctgatctccgcaaactggctgtcaacatggtgcctttc
ccccgtctgcacttcttcatgccaggcttcgcccccctgaccagcaggggcagccagcag
taccgtgccctcacagttcccgagctcacccagcaggtgttcgatgccaagaatatgatg
gctgcgtgcgacccacgtcacggccgctatctgaccgtcgccgctgtgttccgtggccgc
atgtccatgaaggaggttgacgagcagatgctcaacgtgcagaacaagaacagcagttac
ttcgtcgaatggatccccaacaatgtcaagaccgccgtctgtgacattccaccccgtggc
ctcaagatggccgtcactttcattggcaacagcacagccatccaggagctgttcaagcgc
atctccgagcagttcacagccatgttccgtcgtaaggccttcttgcactggtacacaggt
gaaggtatggatgaaatggagttcactgaggcagagagcaacatgaatgatctggtgtct
gagtaccagcagtaccaggacgccaccgccgaggaagagggtgaatttgaggaggaggct
gaagaggatgcttga
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