Lates calcarifer (barramundi perch): 108880702
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Entry
108880702 CDS
T04895
Name
(RefSeq) carcinoembryonic antigen-related cell adhesion molecule 20 isoform X1
KO
K06499
carcinoembryonic antigen-related cell adhesion molecule
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108880702
04147 Exosome [BR:
lcf04147
]
108880702
04090 CD molecules [BR:
lcf04090
]
108880702
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lcf00537
]
108880702
Cilium and associated proteins [BR:
lcf03037
]
Other cilia and associated proteins
Stereociliary proteins
108880702
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108880702
Exosomal proteins of bladder cancer cells
108880702
CD molecules [BR:
lcf04090
]
Proteins
108880702
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lcf00537
]
Antigens
108880702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
ig
I-set
V-set
Ig_6
DUF2828
Motif
Other DBs
NCBI-GeneID:
108880702
NCBI-ProteinID:
XP_050932079
LinkDB
All DBs
Position
LG15:complement(9186405..9189415)
Genome browser
AA seq
330 aa
AA seq
DB search
MESNMNSITMMSYWKNLCCVLLVVLMGKGVSGLGAKVRISWSGEVTAGTSTTFTCSSSCF
PNCIYTWSFKGRTVNGSKLAWTPDGLDSTVELQCTVLNPETGLSSSATSILEIKNPVSVK
VSPPNSVPSLNHPLNLVCHDATSGDLHHPSDLVWYKDGQKVSLRENMRLLQNNLTLHFDS
LLPSDAGFYLCETSLQQTRVSSLGYLLNFDPWNVSISGPDIVFPGRLSQFTCLMSCTLNV
ECTVRWPFKGGFPIGTFLSIHANELKWTPSIPGTFQNFTCVVENVAAGLFAEATKTVEVK
GIPVSGSEVVQLHRLFAVILSLGLLVLLVF
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgaacatgaacagcattaccatgatgtcctactggaagaatctttgctgtgtt
ttgttggtggtactgatgggtaaaggtgtatcaggtttgggggccaaggtgaggatttcc
tggagtggcgaggtgaccgctggtaccagcaccactttcacctgttcttcttcttgtttc
ccaaactgcatctacacctggtcctttaagggccgtacagtcaatgggagcaaattagcc
tggacaccagatggactagacagtacagttgaactgcagtgcactgtcctcaatccagaa
acaggactctccagcagtgcaacctccattttggaaattaaaaatccagtgtctgtgaaa
gtcagtccaccaaacagtgtcccatctctcaaccacccactgaatctggtctgccatgat
gcgacatcaggtgacctccatcacccatcggacctggtctggtacaaagatggacagaaa
gtgagcctgcgtgagaacatgcggctgctgcaaaacaacctcacgcttcactttgactca
ctgttgccgtctgatgctggattctacctctgtgagacctctctacagcagacaagagtt
tccagcctgggctacctgctcaactttgatccatggaatgtcagcatcagcggacctgac
attgtgtttcccggcagactaagtcagttcacctgcctaatgagctgtaccttaaatgtt
gagtgtactgtcagatggccatttaaaggaggtttccccattggaaccttcttgtcaatc
catgcaaatgagctcaagtggaccccttctatacccggtactttccaaaacttcacctgc
gttgtagaaaatgtagctgctggactctttgccgaggccaccaagacggtagaggttaaa
ggcattcctgtctctggatctgaagtggtgcagcttcacagactgtttgcagtgatcctc
agcctgggcctgctggtactgctggtattctga
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