Lates calcarifer (barramundi perch): 108883073
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Entry
108883073 CDS
T04895
Symbol
kcnq1.2
Name
(RefSeq) potassium voltage-gated channel subfamily KQT member 1
KO
K04926
potassium voltage-gated channel KQT-like subfamily member 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108883073 (kcnq1.2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108883073 (kcnq1.2)
Ion channels [BR:
lcf04040
]
Voltage-gated cation channels
Potassium channel, voltage-gated (Kv)
108883073 (kcnq1.2)
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GFIT
Motif
Pfam:
Ion_trans
KCNQ_channel
Ion_trans_2
2TM
CD225
DUF6526
Motif
Other DBs
NCBI-GeneID:
108883073
NCBI-ProteinID:
XP_018531462
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Position
LG10:complement(7055707..7205251)
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AA seq
703 aa
AA seq
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MGERRARSFHMTCHVQRDYGSRLGSSFIGCRPNGYASTSLSLSLDQEMDADLAASTGTTT
SSAALRAPSLDRSHYSPVSLELDPTAVNNGSGIPCCPPADTKDPELQMIHSQPSITSVPP
PLPRSSWLNHHQKDFHSPYIKTSMQGDVYNFLERPAGLKCFLYHFLVFLMVLVCLIFSVL
STIEQYADFATGTLFWMEIVLVLFFGTEYVVRLWSAGCRSKYAGIKGRLRFIRKPISIID
LIVVIASIIVLGVGSNGQVFATSAIRGIRFLQILRMLHVDRQGGTWRLLGSVVFIHRQEL
ITTLYIGFLGLIFSSYFVYLAEKDAVDEEGKTGFSSYADALWWGVVTVTTIGYGDKIPQT
WIGKAIASCFSVFAISFFALPAGILGSGFALKVQQKQRQKHFNRQIPAAASLIQTLWRCY
AAEKPGGCAATWKMYVLTPEAVATMDSDNSSPNVRKLNISKKGTKRRLKSRGNGSMGVGS
ERAVSIPQITYDHIDDSVEKKDVSFFLEEPRGTVEGITRMFRQTVKRNHDNSTSIDISRA
NSLTDELDYMSEDIPLPVVTNKAQLSHAQRSAVKVLRRMQYFVARRKFQQARKPYDVRDV
IEQYSQGHLNMMVRIKELQRRLDGTLGKPGMFLPGKGEDKEYPTIGARLIRLEDKVHQMD
QKMDSVLRILMEQFPPKPELTSKPSIRRVTIQKCKGTSIDEGP
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgggggaaagacgggctcgctccttccacatgacatgccacgtccagcgcgactatggc
agcaggttggggagctccttcataggttgtcgtcccaatggatatgccagcacaagtctc
agcctcagcttggaccaggagatggatgctgaccttgcagcctccactggcactacaacc
agtagcgctgccctacgggctccttcacttgacagaagccactactctcctgtttcactg
gaactagaccccacagcagtgaataatggatcaggcattccctgctgtccgccagcagac
acaaaggacccagagctgcagatgatacacagccagccctctatcacctctgttccacca
cctctccctcgttcgagctggctgaaccaccatcaaaaggatttccacagcccttacatc
aagactagcatgcagggggatgtttacaacttcctagagagacctgctggactgaaatgc
ttcctctaccacttccttgtcttcctcatggtcctggtgtgtctaatcttcagtgtcttg
tcaactatagagcaatatgcagactttgccactggaaccctcttctggatggagattgtg
ctggtgctgttctttggcacagagtatgtggtccggctgtggtcggcaggctgtcgcagc
aaatacgcgggcatcaaaggacgcctccgctttatcaggaagcccatatcaatcatagat
ttgatagtggtcattgcctcaatcattgtgctcggtgtagggtccaatggccaagtgttt
gccacgtctgccatcaggggcatccgattcctccagatcttgcgcatgctacatgtggat
cgacagggaggaacatggaggctcctaggatctgtggtcttcattcatcgacaggagctg
atcacaactctgtacattggattcctgggtctgatcttttcctcctactttgtctacttg
gcagagaaagatgctgtggatgaggagggcaaaactggcttctccagctatgccgatgcc
ctgtggtggggtgtggtgactgtcaccaccatcggctatggagacaaaattccgcaaacg
tggataggcaaagccattgcctcctgcttcagtgtcttcgccatctccttcttcgccctg
cctgctggtatcctgggttcagggtttgcccttaaggtccaacagaagcagagacagaag
catttcaacagacagatccctgctgcagcctctctcattcagacactgtggaggtgctat
gcagcagagaaaccaggcggctgtgctgctacctggaaaatgtacgtcctcactccagag
gctgtcgccacaatggattctgataactccagccctaatgttaggaaactgaacatatcg
aaaaaggggaccaagaggaggctgaagtccagaggtaatggctctatgggggttggctca
gagagggctgtatcaatcccccagatcacttatgatcacatcgacgactctgtggagaag
aaagatgtctcatttttcttggaggagccaagggggactgttgaaggaatcaccaggatg
ttcagacagacagtaaagaggaatcatgacaacagcacctccatcgacatttcccgcgcc
aacagcttaaccgatgagctggactacatgagtgaggacattcccctgccagtggtgact
aacaaagctcagttgtcccatgcccagagatcagcggttaaagtccttcgcagaatgcag
tactttgtggccaggaggaaatttcagcaagcgcggaagccctatgacgtgcgagacgtg
atcgagcagtattcccagggtcacctcaacatgatggtccgcatcaaggagctacagaga
aggctggacggcacactgggaaagccaggaatgtttcttccaggaaaaggggaagataaa
gaatacccaactattggagcacgactgatcaggctagaagataaggtccatcagatggac
cagaaaatggactcagtcctgcggatcctgatggagcagtttccacccaagccagagctg
acgtccaagccctcaatccggagggtgaccatccagaaatgcaagggcaccagcatcgac
gaggggccttga
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