Lates calcarifer (barramundi perch): 108884952
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Entry
108884952 CDS
T04895
Name
(RefSeq) serine/threonine-protein kinase RIO1 isoform X1
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108884952
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcf01001
]
108884952
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcf03009
]
108884952
Enzymes [BR:
lcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
108884952
Protein kinases [BR:
lcf01001
]
Serine/threonine kinases: Other
RIO family [OT]
108884952
Ribosome biogenesis [BR:
lcf03009
]
Eukaryotic type
Pre-40S particles
Kinases
108884952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
YL1
Motif
Other DBs
NCBI-GeneID:
108884952
NCBI-ProteinID:
XP_018534616
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Position
LG4:complement(277031..285907)
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AA seq
546 aa
AA seq
DB search
MSVVECVPGQFDDAEEDSSQSEVSAVLSQISDVTLQPSSHQEEEEEEEDDDDDDDDEDEE
EWAWCSAGGDLTKRYNRTTFNCQSNRQNPTNKTLPSSTPSDKALRKYEHKINLDKLNYAD
SVINKVTTMQKQKDADTYRVKDKSDRATVEQVLDPRTRMILFKMLSRGVISEINGCISTG
KEANVYHASTSAGESRAIKIYKTSILLFKDRDKYVSGEFRFRHGYCKGNPRKMVRTWAEK
EMRNLIRLQTAGIPSPDPLLLRSHVLLMSFIGKDNMPAPLLKNASLSESKARELYLQVLQ
NMRKMFQDARLVHADLSEFNMLYHNGDAYIIDVSQSVEHDHPHALEFLRKDCSNVNEFFV
KHGVAVMTVRELFDFITDPSITCHNIDQYLEKAMVIAAERTSEQRSDQDRVDEEVFKKAY
IPRTLTEVSHYERDIDLMRTKEEESAISGHEDNILYQTLIGLKRDLSGVQTVPALLEDES
SSEEEEEEDDDDDNDTGQQEQSEETPMDRKEKKKMVKEAQREKRKSKVPKHVKKRKEKVA
KMKKGR
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggtcgagtgtgtacctggacagtttgatgacgcagaggaggacagcagccaa
tcagaggtgtcggctgtcctgagtcagatcagtgatgtcactctgcagccttcatcacac
caggaggaggaggaggaggaggaggatgatgatgatgatgatgatgatgaagatgaagag
gagtgggcatggtgttcagcaggaggagatctgaccaagagatacaacaggacgactttc
aactgtcagtccaacagacagaatccgaccaataagacgctgccatcgtcgactccatct
gataaagctctgaggaaatacgaacacaagatcaacctggataaactgaattacgccgac
tcggtgatcaataaagtcacgacgatgcagaaacagaaagacgctgacacgtacagagtg
aaggacaaatcagatcgagccacagtcgaacaggttttagatcctcggactcgaatgatt
ctgtttaaaatgctgagtcgaggagtgatcagtgaaatcaacggctgcatcagcactggg
aaggaggcgaatgtatatcacgccagcacgtcagcaggagagagcagagccatcaagatc
tacaagacctcgatcctgctgttcaaagaccgagacaaatatgtcagtggagagttcagg
ttccgtcatggttactgtaaaggaaaccccaggaagatggtgagaacttgggcagagaag
gagatgaggaacctcatcaggctgcagacggcaggaatcccaagtccagaccctctgcta
ctccggagtcacgttctactgatgagcttcatcggaaaagacaacatgccggctcctctg
ctgaagaacgcctcgttgtcagagtcgaaggctcgtgaactctacctgcaggttctacag
aacatgaggaaaatgtttcaggacgctcgactcgtccacgccgacctcagcgagttcaac
atgctgtatcataatggagatgcttacatcatcgacgtgtcacagtcggtggagcacgat
catcctcatgctctcgagttcctcaggaaagactgcagcaacgtcaacgagttctttgtg
aaacacggtgttgcagtgatgacagtcagagagctgtttgacttcatcacagacccgtca
atcacctgccacaacatcgatcaatacctggagaaggcgatggtgatcgcagctgagcgg
acgtcagagcagcgatcagatcaggaccgagtggacgaggaggtgtttaaaaaggcctac
atcccccgaactctgacggaagtgagtcactatgagcgagatattgacctgatgaggacg
aaagaggaagagtcggcgatctctggacatgaggacaacattctgtatcagacactgatc
ggactgaagagagatctgtcaggagttcagacggttcctgctctcctggaggatgagagc
tcgtcggaggaggaggaggaggaggacgacgacgacgacaacgacacaggtcagcaggag
cagagcgaggagaccccgatggacagaaaggaaaagaagaagatggtgaaagaagctcag
agagaaaaaagaaagagtaaagtaccaaagcacgtgaagaagaggaaggagaaggtggcc
aagatgaagaaaggcagatga
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