Lates calcarifer (barramundi perch): 108885576
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Entry
108885576 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor E3-like
KO
K09105
transcription factor E3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108885576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108885576
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
108885576
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
Motif
Other DBs
NCBI-GeneID:
108885576
NCBI-ProteinID:
XP_050930582
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All DBs
Position
LG12:complement(14395150..14404120)
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AA seq
488 aa
AA seq
DB search
MSSRVLLRQQLMREQAQEQERREAQQQASASQLRASDSTPAISVTLPPNAARPPPAQVPV
EVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTLGNKAVTQTLGVSPAPQSSSAPEIAPTT
SSAPNSPMALLNIGSNKEEIDDVIDDIISLESSFNDDIITLIDSGLQLPSTLPGNLLDVY
HSPGMAAPTLTVSNSCPADLPKIKREITDADAKALLKERQKKDNHNLIERRRRFNINDRI
KELGTLIPKSNDPEMRWNKGTILKASVDYIRKLQKEQQRAKDIEMRQKKLEQANHSLMLR
IQELEMQARLHGLSNSTSISSSLSSDPSLLQQHPVPQSGQSLPPGVGGAASQNLLSLGAI
GQPLPASFLSPPSSDSPAGVTISSPLDLGSLSFTELDDTIXASALYPDVGLGDILMDDGC
TLSPERVGDPLFSPLSPGASKTSSRRSSLEMDGGLVMSPVRQSETVCRDKNVRKCRLSLN
NVSLFIGL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcacgtgtgttgctgcgccagcagctgatgcgagaacaagcccaggagcaggag
agacgtgaggcccagcagcaggcctctgcctctcagcttcgggcctctgactccactcca
gccatctccgtcacacttcccccaaatgccgcccgtccccctccagcacaggtgcctgtg
gaggtgctaaaagtgcagacccacttggagaaccccaccaagtaccacatccagcaggca
cagaggcaacaggtgaagcagtacctctccaccactctgggcaacaaagcagttactcag
accctgggtgtgtcccctgcgccgcagtccagttctgcccctgaaattgcccccactacc
agcagtgctcctaacagtcctatggccctgcttaacattggatccaacaaggaggaaatt
gatgatgtgatcgacgacatcataagtcttgagtccagttttaatgacgacatcattacg
ttgattgactctggtcttcagttgcctagcacgctcccaggaaatctgttggatgtatac
catagccctggtatggcagcacctactctcacagtcagcaactcctgccctgctgatctt
ccaaaaattaaaagggaaattactgatgcagatgccaaagcactattgaaagaaaggcag
aagaaagacaaccataacctcattgagaggaggcggagattcaatatcaatgaccgtata
aaggagctgggtactctaatacccaagtcaaatgaccctgagatgcgttggaataaaggc
accattctgaaagcgtctgtagactacatcaggaagttacagaaggagcagcagagagcc
aaggacatcgagatgcgacagaaaaagctggagcaagcaaaccatagtctgatgttacgc
atccaggagctggaaatgcaggcacggctccacggcctctccaattccaccagcatctca
tctagtctgagctcagacccctccctgctccagcagcacccagtcccacagagcggccag
tctctacctcctggtgtaggaggagccgcctcgcagaaccttctcagtctgggagccatt
ggacagcctttaccagcctccttcttgtccccaccctcctcagactctcctgcgggagtc
accatcagcagccctctggacctgggcagcctgagctttaccgagctagacgacaccatc
nntgcctcggcgctgtaccctgacgtgggcttgggagacattcttatggatgacgggtgc
accctgtctccagagagggtgggagacccgctcttctctcctctgtcaccaggtgcctct
aaaaccagcagtcgcaggagcagccttgaaatggatggaggacttgtgatgagccctgtg
cggcagtcagagactgtctgtagggacaagaatgtcaggaagtgcaggctatccttaaac
aacgtgagtctatttataggactgtag
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