Lates calcarifer (barramundi perch): 108886305
Help
Entry
108886305 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: heparan sulfate glucosamine 3-O-sulfotransferase 1-like
KO
K01024
[heparan sulfate]-glucosamine 3-sulfotransferase 1 [EC:
2.8.2.23
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
108886305
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108886305
Enzymes [BR:
lcf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.23 [heparan sulfate]-glucosamine 3-sulfotransferase 1
108886305
Glycosyltransferases [BR:
lcf01003
]
Unclassified
Sulfotransferases
108886305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sulfotransfer_1
Sulfotransfer_3
Motif
Other DBs
NCBI-GeneID:
108886305
NCBI-ProteinID:
XP_050932519
LinkDB
All DBs
Position
LG16_LG22:complement(1175695..1198842)
Genome browser
AA seq
313 aa
AA seq
DB search
MACFLASAFLLVLQTYAAPPELIQPGFGVTLGSMDLDSGLPANVSGDVTSSPPPGTSKRA
PHSIIIGVRKGGTRALLEMLDIHPEVAAAATEVHFFDWDENYAKGFEWYRELMPYSYPHQ
ITVEKTPGYFTSALAPERICAMNSSIKLLLILRDPAERVISDYTQVYFNRLENHKPVQAI
ENLLVRNGALNIRYKAIQRSLYDIHMRNWLRHFPLEQIHIVDGDALIRDPLPELQKVERF
LNLPPRIVSSNFYFNQTKGFYCIRSDGRERCLHESKGRPHPAVNSTVLQQLRSYLQEHNR
TFFRLVKRTFDWQ
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcttgttttctggcatcagcctttctcctggttctccagacatacgctgctccacct
gagctcatccagccaggatttggcgtaacactgggctccatggaccttgattctggacta
ccagccaatgtctctggagatgtgacctcatccccacccccaggaactagtaaaagggcc
ccacatagtattattattggggtacgcaaagggggcacgagagcgctgttggagatgctg
gacatacaccctgaggttgctgctgctgccaccgaggtgcacttctttgactgggatgag
aactatgccaagggctttgagtggtaccgtgagttgatgccctactcttatccacaccag
atcacagtggagaaaactccaggttactttacgtcagccctggcaccagaacgcatctgc
gccatgaactcctccataaagctgctgttgattttgcgagacccggccgagcgggtcatc
tctgactacacccaggtgtacttcaaccggctggagaaccacaagccggtgcaagccatc
gagaacctgctggtgcgcaacggagccctaaatatccggtacaaggccattcagaggagc
ctctacgacatccacatgcgtaactggctgcgtcacttccccctggagcagatacacatc
gtagatggagatgctctgatccgtgaccctctgccagagcttcagaaggtggagcgcttc
ctcaacttgcctcccaggatagtgtcctccaacttctacttcaaccagaccaaggggttc
tactgtatccgcagtgacggtcgagagcgctgcctgcacgagtctaagggacgtcctcac
ccggccgtcaacagcaccgtcctccagcagctccgctcctacctacaggaacacaaccga
accttcttcaggctggtgaagcgcaccttcgactggcaataa
DBGET
integrated database retrieval system
