Lates calcarifer (barramundi perch): 108886333
Help
Entry
108886333 CDS
T04895
Name
(RefSeq) histone-lysine N-methyltransferase MECOM isoform X1
KO
K04462
[histone H3]-lysine9 N-methyltransferase (ecotropic virus integration site 1 protein) [EC:
2.1.1.367
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00310
Lysine degradation
lcf01100
Metabolic pathways
lcf04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108886333
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108886333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108886333
03036 Chromosome and associated proteins [BR:
lcf03036
]
108886333
Enzymes [BR:
lcf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
108886333
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
108886333
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
108886333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
PRDM2_PR
zf-C2H2_jaz
zf-C2H2_6
zf-H2C2_5
zf-C2H2_8
SET
zf-BED
Motif
Other DBs
NCBI-GeneID:
108886333
NCBI-ProteinID:
XP_018536650
LinkDB
All DBs
Position
LG21:7134032..7263689
Genome browser
AA seq
1272 aa
AA seq
DB search
MRSKGRARKLATSDGDDEFALYSSDILDDVCGSDGDPTPSSALAEDPASPLLSDDEASPR
DPLSFQHPSMFLSQEDLTVPLDFELRQSAVPGGGLGIWSRRKVNIGERFGPYEGEHRPCL
RDPAQGWEILDGSGHVKFCVDASKPDIGSWLKHIQFAPAAKQHNLTACQIDDQIFYKVTR
EIFPGEELLLFMKAEEYSCDTMAPDIHEERQYRCEDCDQHFESRNQLLDHQKQPCGMPPS
SFLNPGGDSDLKAQEPQDLRPLHMSHGLHECKECDQVFPDVQSLEAHVLSHSEEREYKCD
QCPKAFNWKSNLIRHQMSHDSGKHYECENCSKQVFTDPSNLQRHIRSQHVGARAHACSDC
GKTFATSSGLKQHKHIHSSVKPFMCKSLRPYLCEVCHKSYTQFSNLCRHKRMHADCRTQI
KCKDCGQMFSTTSSLNKHRRFCEGKNHFTAGGLFAQGMPLPGAPGLDKSALAMGHSSAGL
ADYFGASRHHGGLTFPAAPAFPFSFPGLFPSGLYHRPPLIPATTSPVRQPTHAPVAGPGA
ELSKSPLLPPSPGTQESRELLKALRKDGGSPGSQMPLSELHTKSSSSSTKQRNKQSDQSE
SSDLDDVSTPSGSDLESTSGSELESDMDSERERGAARENGKGPKRKASEGGPQSPSLTGS
SAAKDFPGPSLIPSSLDEHTAVTGAVNDSIKAIASIAEKYFGSTGLAGLQDKKVGSLPYP
SMFPLPFFPAFSPSVYPFPDRDLRPPGLKGEPQSPADDCKKAQGKSSSESPFDLTTKRKE
EKSAPFTPSKSEASHSGGQDQPLDLSLGPRGRGRNPREEETKKNLSYEEEKGVVEIPKAD
TSLQHARPTPFFMDPIYSRVEKRRMSDPFETLKDKYMRPAPGFLFHPQFRLPDQRTWMSA
IENMAEKLETFGSLKPESGDLLRSVPSMFDFRAPPSALPETLLRKGKERYTCRYCGKIFP
RSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHIRNIHNKEKPFKCHLCDRCFGQQT
NLDRHLKKHENGNLSGTAMSSPQSELDSSSAILDDKEDSYFNEIRNFIGNTGQNQTSPDP
SEEGLNGGPFEEEKPLMASHGSRDLEDEEVEELGADEEEGEEPSNTSGKPEGEVPPSNLS
DDIIQDEMDFTGPNDLNLNCKTSPRGYKDEEEQSGYSALDHIRHFSDMRKLEESELSDGD
GEEDDGSFGSPSLTEAVKQPLFRKSKSQAYAMMLSLAEKDSLHPATHTPATMWHSLARAA
AESSAIQSLSHV
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgaggtccaaaggcagggcacggaaactggccacgagtgacggtgatgatgagtttgct
ctttactcttccgacatcttggatgacgtgtgcggctccgatggtgatcccacaccttct
tcggctctggcagaggatccggcgtccccactgctctccgatgacgaggcttcaccccgg
gacccgttgtcattccaacatccaagcatgtttttatcccaagaagatttgaccgttccc
ctggactttgaactgcgacagtcagcagttccaggcggaggcctgggcatctggagccgc
aggaaggtaaacatcggggagcgttttggaccatatgaaggagagcacaggccttgtctc
cgagaccccgctcaaggctgggagatcttggacgggtcaggccatgtaaaattttgcgtg
gatgccagcaagccagatatcgggagctggctgaagcacatccagtttgcccctgcggcc
aagcagcataacctgacagcgtgccagatagatgatcagatcttctacaaagtcaccaga
gagattttccccggtgaggagctgctacttttcatgaaggctgaagagtattcatgtgac
accatggctcctgacattcacgaggagaggcagtatcgctgtgaggactgtgaccagcac
tttgagtcccgtaaccagctgctggaccaccagaagcagccatgtgggatgcccccctcc
tccttccttaacccaggaggtgacagtgacctaaaggcccaggaacctcaagacttgcga
cccctccacatgtcccatggtctacacgagtgtaaggagtgtgaccaagtcttccctgat
gtccagagtctggaggcccacgttctgtcccactctgaggagagggaatacaagtgcgac
cagtgccccaaggccttcaactggaaatcaaacctgatccgacatcagatgtcgcatgac
agtggcaagcactacgaatgtgaaaactgctcaaagcaggtgttcacagaccccagtaac
ctgcagaggcacatccgctcacagcacgtcggggcacgggcccacgcctgctccgactgt
ggcaagacgtttgctacgtcttcgggcctcaagcagcataagcacatccacagcagtgtc
aagcccttcatgtgtaagtcactaagaccctacctatgtgaggtatgccacaagtcctac
acccagttctctaacctgtgccgccacaaacgcatgcatgctgactgccgcacacagatc
aaatgcaaggactgtgggcagatgttcagcaccacgtcctccctcaacaagcaccggcgc
ttctgtgaagggaagaaccatttcacagcagggggattgtttgcccagggtatgccactc
cctggtgccccaggcttggacaaatcagctctggcgatgggccacagcagtgccggactg
gctgattactttggggccagtcgccaccatggcgggcttaccttccctgctgccccagcc
tttcctttcagcttccctggtctcttcccctctggactctaccaccggccaccgctcatt
cctgccaccacctctcccgtcagacaaccaacccatgcacctgttgcaggacctggcgca
gagctaagtaagagtccactgctgcctccaagccctggcactcaagagtcccgagagctc
ctcaaagctctccgtaaagatggcggttcacctggcagtcagatgccactctcagagctt
cacactaagagctcctcatcctccacaaagcagcgaaacaagcagagtgaccagtccgag
agcagcgacctggacgatgtgagcacgcccagcggaagtgacctggagagcacatcgggc
tccgagctggagagtgacatggacagtgagagggagaggggggctgctcgagaaaatggc
aaaggccccaagaggaaggctagtgagggaggcccccagagccccagcctgacaggcagc
agtgctgccaaagactttccaggcccttccctcattccatcctcgctggacgagcacaca
gctgtaacaggggctgtgaatgactcaattaaggccattgcctccattgctgagaagtac
tttggctccacagggctggctggcctgcaggacaagaaggtcgggtctctgccctatccc
tccatgttcccactgcctttcttcccagctttctctccttcagtttaccctttcccagac
agggacctcagacctccaggcctaaagggcgagcctcaatctccagcagatgactgtaag
aaggctcagggcaaatcttcatctgagtcaccatttgacctcactaccaagcgaaaggag
gaaaagtcagccccgttcactccctccaaatcagaagcctcccactctggtggtcaggat
cagccactagacctgagcctagggcccaggggccgtggccgcaatccaagagaggaagag
acaaagaagaacctcagttacgaagaggagaagggagtggtggagattccaaaagcagac
acctccttacagcatgccaggcccacacctttcttcatggaccccatttacagcagggtt
gagaagaggagaatgagcgatccgtttgagactctgaaagacaagtacatgcggccagct
ccaggcttcctcttccatccacagtttcgtttgccagatcagagaacttggatgtcggcc
atcgagaacatggcagagaagctggagacatttggctccttgaagccagagtctggtgac
ctgctgcgctctgtcccctccatgtttgacttcagagccccaccctctgcacttcccgag
acgctgctgcgcaagggcaaggagcgctacacatgcagatattgtgggaaaatatttcca
cgctctgccaacctgacacgccacctcaggactcacacaggagagcaaccgtataggtgt
aaatactgcgaccgctccttcagcatctcttccaacctgcaacgtcacattcgtaacatc
cacaacaaggagaaacccttcaagtgccacttgtgcgaccgttgcttcggtcagcagacc
aacctggaccgtcacctcaagaagcatgagaatggcaacctgtcaggcactgcgatgtca
tctcctcagtctgaactggacagtagcagcgccatattggatgacaaagaagactcttat
ttcaacgaaataagaaatttcattggcaacactggccagaaccagacatccccagacccc
tccgaggaagggttaaatggtggtccatttgaagaggagaagccacttatggccagccat
ggatcacgtgacctggaagacgaggaagtggaggagcttggtgctgatgaagaagaaggg
gaagagcctagcaacacctctgggaaaccagaaggcgaggtgcctccgagcaaccttagt
gatgacatcatacaggacgaaatggacttcactgggccaaacgacttgaacctcaactgc
aaaacctctcctagggggtataaggatgaggaggagcagagcggctactcagccttggat
catattcgtcacttttcagacatgcgcaagctggaggaaagcgaactgagtgatggagat
ggagaggaggacgatggatcatttggctccccctctctgaccgaggcagtcaaacagcca
ctttttaggaaatcgaagtctcaggcgtatgccatgatgctgtctctggctgaaaaggac
tctctccacccagctacccacaccccggccaccatgtggcacagtctggcacgggctgct
gctgaatccagcgccatccaatccctcagccatgtatga
DBGET
integrated database retrieval system
