Lates calcarifer (barramundi perch): 108886443
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Entry
108886443 CDS
T04895
Symbol
parp3
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP3 isoform X1
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03410
Base excision repair
lcf04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108886443 (parp3)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
108886443 (parp3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcf03032
]
108886443 (parp3)
03036 Chromosome and associated proteins [BR:
lcf03036
]
108886443 (parp3)
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108886443 (parp3)
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
108886443 (parp3)
DNA replication proteins [BR:
lcf03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
108886443 (parp3)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
108886443 (parp3)
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
108886443 (parp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
WGR
Pyridox_ox_2
Motif
Other DBs
NCBI-GeneID:
108886443
NCBI-ProteinID:
XP_018536822
LinkDB
All DBs
Position
LG12:22511274..22515442
Genome browser
AA seq
531 aa
AA seq
DB search
MAPKRRAASAAKAGGKKAKEEPETSKPKDAFTSAKEALLAAGPQVKGKRKVDEHCSLSGS
GEVHEDYDCMLNQTNIGHNNNKFYVIQVIKANKKYYSWNRWGRVGEVGQSKLNPCNKVED
AIKDFEKKFKDKTKNNWSDRMNFVSHAGKYTLIEVDGEQDAEIKVDSVDGKSVKVPKNVL
PCTLDKATQHLIELIFSNDMFKEAMECMNLDIKKMPLGKLSKLQIAKGFEVLEEIEAAMK
QKKGRARLEELSSKFFTTIPHNFGRNRPPTIDNTEIVEKKKEMLMVLADIELAQTLKSET
EKAQEEMIETVPHPLDQDYNSLNCQLTLMDKDAETFKTIEKYLTATKDEYQKTKILNVWE
IDRGTEGERFRENDGLENRRLLWHGTNIAVVAAILKSGLRIMPHSGGRVGRGIYFASENS
KSACYVRTSKNTGVMFLNEVALGKEYTITKDNCSLRKAPAGYDSVVARGTVEPDPSKDIF
ITLEGKKVSVPQGKPIPQPQYAGSSFSNSEYLIYKESQCRIRYLLELHMTY
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaaagagacgggctgcttctgctgccaaggctggtggcaagaaggccaaggag
gagcctgagacatcaaagcccaaggatgccttcacctctgcaaaagaggcccttctggct
gcagggccacaggtaaaaggcaagaggaaggtggatgagcactgctcactgtcgggctct
ggagaggtacatgaggactatgactgcatgctgaatcagacaaacattggacataacaat
aataagttttatgtcattcaagttattaaagcaaacaagaagtactattcatggaacaga
tggggtagggtgggtgaagtgggacaatccaaactcaacccttgtaataaagttgaggat
gccatcaaggactttgagaaaaagtttaaggataaaacaaagaacaactggagcgatcgg
atgaattttgtgtcccacgctgggaagtacaccctgattgaggtggatggagagcaggat
gctgagattaaggtggacagtgttgatgggaaatctgtcaaagtccctaaaaacgtccta
ccttgcaccctcgataaggctacacagcacctcatcgagctaattttcagcaatgatatg
ttcaaggaggcaatggaatgtatgaacttagacatcaagaagatgcctttgggcaagctg
agtaagctgcagattgcaaagggctttgaagtgctagaggaaattgaggcagccatgaaa
caaaaaaaaggaagagcacgcctggaagaactttcctcaaagttcttcaccacaatccca
cacaactttggccggaacagaccgccaaccatcgacaacacagagattgtggagaagaag
aaagagatgcttatggtgctggctgacattgagcttgcccagactctgaagtccgagaca
gagaaggctcaggaagagatgatagagactgttcctcaccctctagaccaagactacaat
tctctcaattgccagctcactctaatggacaaagatgcagaaactttcaagaccatagag
aaatacctgacagcaactaaagatgagtatcagaaaacaaaaattcttaatgtctgggaa
atcgatcgagggacagagggagagcgcttcagggagaacgatggtctggagaaccgtcgt
ctgctgtggcatggtacaaacatagcggtggtggcagccatcctgaagagtggtctgagg
ataatgccccattcaggaggccgtgttggtcgtggaatctattttgcatctgaaaacagc
aagtctgcatgttacgtgcgcacttccaaaaataccggagtgatgtttctgaatgaagta
gccctcggcaaagaatatactatcaccaaagacaactgctccttgaggaaggctcctgca
ggttatgatagtgtagtggcacgaggaacagtggaaccagatccctctaaggacatcttc
atcactctggagggcaagaaggtttctgtgcctcagggtaagcccatacctcagccccag
tacgcagggagcagcttcagcaacagcgaatatctcatctacaaagagagtcagtgtcgc
attcgctacctgttggagctgcacatgacgtactaa
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