Lates calcarifer (barramundi perch): 108888618
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Entry
108888618 CDS
T04895
Symbol
sstr3
Name
(RefSeq) somatostatin receptor type 5
KO
K04219
somatostatin receptor 3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108888618 (sstr3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108888618 (sstr3)
G protein-coupled receptors [BR:
lcf04030
]
Rhodopsin family
Peptide
Somatostatin
108888618 (sstr3)
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srv
7TM_GPCR_Srx
TAS2R
7TM_GPCR_Srw
PGA2
TctB
Motif
Other DBs
NCBI-GeneID:
108888618
NCBI-ProteinID:
XP_018540204
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Position
LG11:2664014..2679988
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AA seq
488 aa
AA seq
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MGDFSLPGLEMTDEMWENGSFASPSPGLPLFLLMFNNSDLNETLFNATNSTNSTGPDVPS
GPSVAGVLIPLIYIIVCIIGLGGNTLVIHIVLHYSKIESVTNIYILNLAIADELFMLGLP
FLAVQNTLQSWPFGSFMCRLVMTVDSINQFTSIFCLTVMSIDRYLAVVHPIRSSKWRRPQ
VAKVVNGTVWALSFLVVLPVVIFANIQKAGGTCNIAWPQPANIWRAAFIIYTSTVGFFCP
LLIICLCYLLIVFKIRSSGKKVHATSTKRRKSERKVTRMVVIVVAVFVFCWLPFYALNII
NLLVSLPSEYQCLYYFVVVLGYANSCANPIVYGFLSDNFKRGFRKALCRSTRKVENHEPM
ERQQQQEEGRRALMPRESLRRAIRDEEDDDDEDISEMTEIYRIAQNGNSSFQPQSSQPLF
SEKGATPGATELSSPDKKDKAGDMKGKDPVNGSALTVPLLLNGAKNGSIKTLPEENLEQS
TSLEISYL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacttctcgcttcccgggctggagatgacggatgagatgtgggagaacggcagc
tttgccagcccctcgcctggactccccctgtttctgctcatgttcaacaacagtgatctg
aacgagacgctgttcaacgccaccaactccaccaactccaccggcccagatgtcccctcg
ggtcccagcgtggcaggggtcctcatcccactcatatacatcattgtttgtatcattggg
ctgggtggaaacactttagtgattcacattgtactgcactactcgaagatagagtcagtc
accaacatctacatcctcaacttagccatcgccgacgagctcttcatgctcggcctgcct
ttcttagcggtgcagaacacgctgcagtcgtggcccttcggctcattcatgtgccgcctg
gtcatgaccgtcgactccatcaaccagttcaccagcatcttctgtctgaccgtgatgagc
atcgaccgctaccttgccgttgttcacccaattcggtcttcaaagtggcggcggcctcag
gtggccaaagtggtgaatggcaccgtgtgggcgctgtcgtttcttgttgttctgcctgtg
gtcatcttcgccaacatccagaaggcgggaggcacctgtaacatcgcctggcctcagcca
gccaacatctggagggcggccttcatcatctacacctccactgttggattcttctgccct
cttctcatcatctgcctctgttacctgctcattgttttcaagatccgcagctcgggtaaa
aaagtccacgccacctccaccaagcgcaggaagtcagagcggaaagtgacgcgcatggtt
gtgattgttgtcgccgtgttcgtcttctgctggctgcccttctacgccctcaacatcatc
aacctactggtgtccctgccctcagagtaccagtgcctttactattttgtcgtagtgctc
ggttacgccaacagttgcgccaaccccattgtctatggtttcttgtcagacaacttcaag
aggggtttccggaaagcgctctgccgctccacaaggaaggtggagaaccacgagcccatg
gagcgccagcagcagcaggaggaagggaggagggcactcatgcccagggagagcttgcga
cgagcgatcagggacgaagaggacgatgatgatgaagacatctcagaaatgactgagatc
tacagaattgcccagaacggaaacagcagcttccagccgcagagctcacagccgctgttc
tcagagaaaggagcaactccaggggcaacagagctgtcatccccagacaagaaggacaaa
gccggggacatgaaggggaaagatccggtcaacgggtctgcgttgactgtcccattgctg
ctcaatggagccaaaaatgggagcatcaaaactctgccagaggaaaacttggaacagagc
acctcattggaaataagttatttatag
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