Lates calcarifer (barramundi perch): 108888682
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Entry
108888682 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate decarboxylase 1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00250
Alanine, aspartate and glutamate metabolism
lcf00410
beta-Alanine metabolism
lcf00430
Taurine and hypotaurine metabolism
lcf00650
Butanoate metabolism
lcf01100
Metabolic pathways
Module
lcf_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
108888682
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
108888682
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
108888682
00430 Taurine and hypotaurine metabolism
108888682
Enzymes [BR:
lcf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
108888682
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Motif
Pfam:
Pyridoxal_deC
Aminotran_5
SepSecS
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
108888682
NCBI-ProteinID:
XP_018540292
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Position
LG1:complement(18355581..18372566)
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AA seq
593 aa
AA seq
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MAASAPSSSSSGGEPDPNSANLRPPGSSYDAWCGVAHGCTRKLGMKICGFLQKNNSLEER
SRIVSSFKERAAKNLLSCDNIGGDARFRRTETDFSNLFARDLLPAKNGEEQTIQFLLEVV
EILTNYIRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDQPESLEQILVDCRDTLKYGVR
TGHPRFFNQLSTGLDIVGLAGEWLTSTANTNMFTYEIAPVFVLMEQLTLKKMREIIGWPD
GEGDGIFSPGGAISNMYSVMIARYKFFPEVKTKGMAAAPRLVLFTSEHSHYSIKKASAAL
GFGTENLILLNTDERGRVIPADLEAKVIEAKQKGYVPMFVNATAGTTVYGAFDPINEIAD
ICEKYNIWLHVDGAWGGGLLMSRKHRHKLNGVERANSVTWNPHKMMGVPLQCSAILVRER
GLLQGCNSMCAGYLFQPDKQYDVTYDTGDKAIQCGRHVDIFKFWLMWKAKGTIGFEQHID
KCLDLSAYLYNKIKNREGYEMVFNGEPQHTNVCFWYIPPSLRGLPDSEERWERLHKVAPK
IKAMMMESGTTMVGYQPQGDKVNFFRMVISNPAATRSDIDFLTEEIERLGHDL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtctgcaccctcctcctcctcctccggcggcgaaccggatcccaactcggca
aatttacgaccaccgggctcaagctatgatgcttggtgtggagttgctcatggatgtact
agaaaactgggaatgaagatatgtggatttttgcagaagaataacagcctggaggagagg
agcaggattgtgagttccttcaaggagcgcgcagccaagaacctgctgtcctgcgataac
atcggcggagatgcgcgtttcagacgcacggagacggatttctccaacctgttcgccaga
gatctgttgcctgccaaaaatggggaggaacagaccatacagttcttgctggaggtcgtg
gaaatcctcaccaactacatccgaaagacctttgacagatccaccaaggtcctggacttc
caccacccccaccagctgctggagggcatggagggcttcaacctggagctctctgatcag
cctgagtctctggagcagatcctggtggactgcagggacaccctgaaatatggagtgagg
acaggtcaccccaggttcttcaaccagctgtccactggattagacatcgttgggttggca
ggagagtggcttacctctacagccaacactaacatgtttacctatgagatcgcccctgtc
tttgtactcatggagcagctcacactgaaaaagatgagagagatcattggctggcctgat
ggagagggtgatggaatattttctccaggaggagcaatctccaacatgtacagtgtgatg
attgccagatacaagttcttccctgaagttaagaccaaaggcatggcagctgcacccaga
ctggtcctcttcacctcagagcatagccactattccatcaagaaagccagtgcagctctg
ggctttggaacagaaaacctgatcctcttgaacacagatgagagagggagagtcattcct
gctgatttggaagccaaagtaatagaggccaagcaaaaggggtacgttccgatgtttgtg
aatgccaccgctggcaccactgtctacggagcctttgaccccatcaatgaaatcgcagac
atctgtgaaaagtacaacatttggctccacgtggatggtgcctggggaggaggtttgctg
atgtccaggaaacacagacacaagctgaatggagtggagagggccaactcagtcacctgg
aacccccataagatgatgggagtgccactgcagtgctctgctattctggtcagagagagg
ggattactacaaggctgcaactccatgtgtgccggctacctcttccagccagataaacag
tacgatgttacatatgacacaggcgacaaggccattcagtgtggacggcacgttgatatc
tttaagttctggcttatgtggaaggcaaagggaacaataggatttgagcagcatattgac
aagtgcctggatctgtcagcatatctctacaataagataaaaaacagagagggatacgag
atggtgtttaacggagagccgcagcacaccaatgtctgcttctggtacattccaccgagc
ctgcgaggtttgcctgatagtgaagagagatgggagaggttgcacaaggtggccccaaag
atcaaagccatgatgatggagtctgggactacaatggtgggttaccagcctcaaggagac
aaggtcaactttttccgcatggtcatctccaaccctgctgctaccaggtcagacattgac
ttcctgactgaggagatcgagcgactggggcatgacttgtaa
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