Lates calcarifer (barramundi perch): 108889385
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Entry
108889385 CDS
T04895
Symbol
hyal2b
Name
(RefSeq) hyaluronidase-2
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00531
Glycosaminoglycan degradation
lcf01100
Metabolic pathways
lcf04142
Lysosome
Module
lcf_M00076
Dermatan sulfate degradation
lcf_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
108889385 (hyal2b)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108889385 (hyal2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
lcf02042
]
108889385 (hyal2b)
00536 Glycosaminoglycan binding proteins [BR:
lcf00536
]
108889385 (hyal2b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lcf00537
]
108889385 (hyal2b)
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
108889385 (hyal2b)
Bacterial toxins [BR:
lcf02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
108889385 (hyal2b)
Glycosaminoglycan binding proteins [BR:
lcf00536
]
Heparan sulfate / Heparin
Enzymes
108889385 (hyal2b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lcf00537
]
Enzymes
108889385 (hyal2b)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
EGF
C8A_B_C6_EGF-like
Motif
Other DBs
NCBI-GeneID:
108889385
NCBI-ProteinID:
XP_018541325
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All DBs
Position
LG12:23738113..23744287
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AA seq
475 aa
AA seq
DB search
MEPVFHSLFTTAGQLPWLLLTLITLWTVLCSADVKQTRWPLYSQKPVLLVWNAPTQECAP
RHGVTLSLGQFDIVASPNEGFVRQNLTIFYKERLGLYPYYERGIAVNGGLPQLASLTQHY
EKMPEGVQKYIREPDAKGLAVIDWEEWRPLWIRNWDSKDIYRNKSRELVAKKNPNWPPEQ
VGKVAQQEFELSARKFMLETLKLAKNLRPNQLWGFYLFPDCYNHDYRNGLKDYTGRCPGV
EMSRNDQLNWLWMECTAFFPSIYMGSVLASTNYGRLFVRNRVKEAMRLASVGDGLARPVF
VYTRPNYISQMTLLSETDLVSTIGESVALGAAGVIFWGDSSYGSSTASCSKLNGYLQGPL
GRYLLNVSTAAEQCSQTMCKSHGRCLRRVSDTDVYLHLSPSTHTITSQGGQLKVTGAPGQ
AELAVFRTHFQCQCYSGYRGEACAEKEKGQNRASSVLGTWPLCLLLPLGLLTLLH
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgtatttcactctctcttcaccacagctggccagctgccctggttgcttctg
actcttattacattgtggacagtgttgtgttcagcagatgtaaagcagacaagatggcca
ttatattcccagaagcctgttcttcttgtctggaatgccccaacacaggagtgtgctccg
cgacatggtgtaactttatctcttggccagtttgacattgtggcatcccccaatgagggc
tttgtccggcagaatctcacaattttctataaggagcgcctcgggttgtatccttattat
gagcggggcattgcagtgaatggaggtcttccacagcttgccagcctcactcagcactat
gaaaagatgcctgaaggtgtgcagaaatatatacgtgagccagatgcaaaaggtttggct
gttattgactgggaggagtggcgcccactgtggatccgaaattgggacagtaaagatatc
tatcggaataaatctcgtgaactggtggccaaaaagaatcctaactggcccccagaacaa
gtgggaaaagttgcacagcaggaatttgagctatcagctcgcaaatttatgctggagact
ctaaaactggccaagaatctgaggcccaatcagctctggggcttctacctgtttccagat
tgttacaaccatgactacaggaatggcttaaaggactacacaggccgttgccctggtgtg
gaaatgtcccgcaatgatcagctgaattggttgtggatggagtgtacagcattcttcccg
tctatatacatgggttctgttctagcctctacaaattatgggcgactctttgtccgaaac
agggtgaaggaggcgatgcgcctggcatctgttggggatggattagcacgccctgttttt
gtttataccagacctaattacatcagtcagatgaccctcctatctgagacagacctcgtc
tccaccatcggtgagagtgttgcacttggagctgcaggtgtaatcttctggggggacagc
tcctatggaagcagcactgccagctgctccaaactaaatgggtatcttcagggaccgctg
ggccggtacctgctcaatgtgtccacggcagcggagcagtgcagtcagacaatgtgtaaa
tcccacggccgctgtcttcgcagagtatcggacactgatgtgtacctgcacctcagcccc
tcaacacacaccatcaccagtcagggtggccagctgaaggttacaggagcgcccggccaa
gccgagctggctgttttccgcacacacttccagtgccagtgctacagtgggtacaggggt
gaggcttgtgctgagaaagaaaaagggcagaatagagcctcctctgtcttaggaacctgg
cctctttgcctcttactcccactaggactcctcactctgctacactga
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