Lates calcarifer (barramundi perch): 108889878
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Entry
108889878 CDS
T04895
Name
(RefSeq) SLIT-ROBO Rho GTPase-activating protein 3 isoform X1
KO
K07526
SLIT-ROBO Rho GTPase activating protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108889878
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Bin/Amphiphysin/Rvs (BAR) family proteins
F-BAR proteins
108889878
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
108889878
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGAP
FCH
SH3_1
SH3_2
SH3_9
Flg_hook
FlaC_arch
MPM1
Motif
Other DBs
NCBI-GeneID:
108889878
NCBI-ProteinID:
XP_018542070
LinkDB
All DBs
Position
LG12:24597248..24632826
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AA seq
1112 aa
AA seq
DB search
MSSQAKVKKDKEIIAEYETQVKEIRNQLVEQFRCLEQQSESRLQLLQDLQEFFRRKAELQ
LEYSRGLDKLAERYSAKIRTSREHQHFKKDQNLLSTVNCWYLVLDQTRRESRDHATLSDI
YNNNVIVRLAHVGEDVIRLFKKSKDIGVQMHEELVKVTNELYTVMKTYHMYHTESLSAES
KLKDAEKQEEKHIGKANDISAGLLRYGHDERPQRRSSVKKMEKMKEKRQAKYSENKLKCT
KARNDYLLNLAATNALVAKYYIHDVSDMIDCCDLGYHASLARTMRTYLSAEYSLETSRHE
GLDLLEGAVDAMDIRGDKLKFMDTHCQIFCPPARFDYQPHMGDEVCQVSAQQPVQTELLM
RYHQLQSRLATLKIENEEVRKTLDATMQTLQDMLTVEDFDVSEAFQHSQSTESVKSASSD
SYMSKANIAKRRANQQETEGFYFTKYKEYLNGSNLIVKLQAKHDLLKQTLGEGERAEYGT
TRPPTLPPKPQRLRKSRPRSIFNRKLFNGNMEAFIQDSGQPIPVVVESCIRYINLYGLQQ
QGIFRVPGSQVEVNDIKNAFERGEDPLVDDQTDHDINSVAGVLKLYFRGLENPLFPKERF
LDLISTTKLDPGGERAHHLQQIIVTLQRPVIIVMRYLFAFLNHLSQYSDENMMDPYNLAI
CFGPTLMPIPDDQDPVACQAHVNEVIKTIIIHHEVIFPTQRELEGPVYEKCMAGGEEYCE
SPHSEPGALDEVDNGTGPNTSDEELEQIEAIAKFDYVGRSPRELSFKKGASLLLYLRASE
DWWEGRHNGVDGLIPHQYIVVQDMDDAFTDGIHRTDSEASSGPHHDDRASSRNEHQSPCE
HTPEHRFGAALGRVRVRSDGAAVPRHRNGADSHSPTRAPDQPPRVMPRPCSPHKIAVSRG
PTDSPEKRRLTTFGSAGCINHPDRKAFIDSHSQRSSPSTARHASLGDHKALEAEALAEDI
EKTMNTALHELRELERQNVAKHAPDVVLDTLEPLKHPSGGQDPPGSPLHTMVIRDPDAAQ
RRSSSSSSSETMTTFKPALSARRPSAPLRPPPVRPVRPAPVIGQGQGPHRSSSSSSSGLG
SPGITPTDRVFPKAPSPSPSTSSSSSDKQGNM
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcaggcgaaagtcaagaaggacaaagagattattgccgaatatgagacccaa
gtgaaagagatccgtaaccagctggtggagcagttccgttgtctggagcagcagtccgag
tcccggctccagctgctgcaagacctgcaggagttcttccgtcggaaagcagagctccag
ctcgagtactccagaggcctggacaaactggccgagcgctactctgccaagatccgtacc
tccagagagcaccagcacttcaaaaaggaccaaaatctgctgtccactgtgaactgctgg
tatttggtcttggaccagactaggcgggagagcagagaccacgccaccctcagcgacatc
tacaacaacaacgtcattgtccgcctggcgcacgtgggcgaggatgtcatcagacttttc
aaaaagagcaaagacatcggggtgcagatgcatgaggagttagtgaaagtcaccaatgag
ctctacactgtgatgaagacgtaccacatgtaccacactgagagcctcagtgctgagagc
aagctgaaggatgcagaaaaacaggaggagaagcacatcggaaaggccaacgacataagt
gccggcctgctgcgttatggtcacgacgagcgtccgcagcgacgaagctctgtcaagaag
atggagaaaatgaaggagaagagacaagccaagtactctgaaaacaagctgaaatgcaca
aaggcccgcaacgattatcttcttaatctggcagccaccaacgccctggtggccaaatac
tacatccacgatgtctcagatatgatagattgttgtgacttagggtaccatgcaagcctg
gcacgcaccatgagaacctacctgtctgcagagtacagtctggagacttctcgccatgag
ggtttggacttactggagggagcggttgatgccatggacatcagaggggacaaactgaaa
tttatggacacacactgccagatcttctgtcctccagcacgctttgactatcagccgcac
atgggcgacgaggtgtgtcaggtgagcgcacagcagcctgtccagacagagctcttgatg
cgctaccaccagctgcagtctcgcctggctacgctgaagatagaaaatgaagaggtgagg
aagactcttgacgccaccatgcagacccttcaggacatgctcactgtggaagactttgat
gtttcagaagccttccagcacagccaatccacagagtcagtcaaatcggcttcctccgac
tcctacatgagcaaggcgaacatcgccaagagacgagccaatcagcaagagactgagggc
ttctacttcactaaatacaaggagtacttgaatggcagcaatctcattgtcaaactgcag
gcgaagcatgaccttctgaagcagacgctaggagagggggagagggctgaatatggaaca
acaaggccccctactcttccccctaaacctcagagattgcggaagtctagacctcgctcc
atttttaaccgtaagctgtttaacggcaatatggaggccttcattcaggactcagggcag
cctataccagtggtggttgagagctgcattcgatacatcaatctgtacggtctccaacag
caaggtatatttcgagtgccaggctcccaggtcgaagtcaacgatattaaaaatgcattt
gaaagaggagaggatccactggtggatgatcagactgatcatgacataaactctgtggca
ggtgttcttaagctctacttcagggggctggaaaacccgctgttccctaaagagcgtttc
ctcgacctcatatctactaccaagcttgacccaggtggagaaagagctcatcaccttcag
cagataattgtgactctccagcggcctgtgatcatcgtcatgagatatctgtttgcgttt
ctaaatcatctttcccagtacagtgatgagaacatgatggatccctacaacctggctatt
tgctttggtcccacattgatgcccataccagatgaccaggaccctgtggcctgccaggcg
catgtgaatgaggtcattaagaccattatcattcaccatgaggtcatcttcccaacccaa
cgagagttggagggacctgtttatgaaaagtgcatggctggaggggaagagtactgtgaa
agcccccacagtgagccaggagctcttgatgaggtagacaacggcaccggccctaacact
agtgatgaagagttggagcagatcgaggccatagcaaagtttgactatgtgggccggagt
cctagagagctttccttcaagaagggagcatctctgttactctacctgcgagcctctgag
gactggtgggagggccgacataacggagtggatgggctgatcccgcatcagtatattgtg
gtgcaagacatggatgatgcattcacagacggcattcacaggactgatagtgaggccagc
agtggaccgcaccacgatgacagagcctcatcccgaaatgaacaccagtctccttgtgaa
cacacacctgagcatcgctttggagcagcattggggagagtgagagtgcgatcagatgga
gcggcagtaccgcgccacaggaacggtgctgacagtcacagccccaccagggctccagac
cagccccctagggttatgcctcggccctgcagcccacacaaaatagctgttagcaggggc
ccaacagacagtccggagaaacggcgtctcaccacatttggcagcgcaggctgcatcaac
caccctgacaggaaggccttcatcgacagccactctcaacggtcttcacccagcactgct
cggcacgcaagtttgggagaccacaaagctcttgaagctgaagcgcttgctgaggatata
gagaaaacaatgaatacagctctccatgagttgcgggagctggagcgacagaatgtagcc
aaacatgcccctgatgttgttctggacactctggagcccctcaaacaccccagtggaggc
caggatccgcctggcagccctctccacaccatggtgatccgggatccagacgcggcccag
cgacgtagcagcagcagctcctcctccgagaccatgaccacttttaaacctgccctgtca
gcgcgcaggccaagcgcacctctgaggcccccgcctgtcagacctgtccggcccgctccc
gtgatcggacaggggcagggaccgcaccgctccagcagctctagttcctccggtcttggc
agcccaggcatcaccccgactgacagggtcttccccaaagctccctccccgtcaccatcc
acctcctcctcctcctcagacaaacaaggtaacatgtag
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