Lates calcarifer (barramundi perch): 108890572
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Entry
108890572 CDS
T04895
Symbol
tfe3a
Name
(RefSeq) transcription factor E3a
KO
K09105
transcription factor E3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108890572 (tfe3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108890572 (tfe3a)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
108890572 (tfe3a)
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GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
HLH
DUF3371
Motif
Other DBs
NCBI-GeneID:
108890572
NCBI-ProteinID:
XP_018542993
UniProt:
A0A4W6EK44
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Position
LG6:27641161..27653954
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AA seq
512 aa
AA seq
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MSAVSPDQIQTGEQNRTGAEPEQQDTGILQPQTVFVILDSAETLNLVRVESGIVADIEVD
SLLPSGCDTFYQIKSQPISISSSAAASSSSSSSSSLPSVMSSRVLMRQDLMRQQALEEEQ
KEAQQQLLRSADSSSPISVSVSSSCRPPAQVPVEVLKVQTHLENPTRYHIQQAQRQQVRQ
YLSTKTANQEPAGPSPSHSPQLGSAPGLQPSDGKQEMEETVIDDIISLESSLNDEFLTLI
DSGLQLANTLPVSGTMLDMYGGSGGMATPTITVSNSCPAELHAVKRELSDVETKALIKER
QKKDNHNLIERRRRFNINDRIKELGALIPKSTDLEMRWNKGTILKASVDYIRKLQKEQQR
AREMEERQRRLENTNRSLLLRIQELELQARFHGLSSSSSPPPTSSSSSLDPQTLLSPTLP
HPFSSSSPSLATPSLGLDALSFVELDEPRGASTVFSPDLMSDVGLTELHVLGDILMEAEG
GGGGGVMSDPLLSCGASKTSSRRSSFSMDEDL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctgtcagcccggaccagatccagaccggggagcagaaccgaaccggggccgag
ccggagcagcaggacaccgggatcctgcagccgcagaccgtgttcgtcatcctggactcg
gctgaaacactcaatctggtccgggtggagtctgggatcgtcgctgacatcgaggtggac
agtttgctgccctcaggctgcgacaccttctaccagatcaagagtcagccaatcagcatc
agttcgtcagcagcagcttcctcctcttcctcctcgtcatcctctctgccatcagtcatg
tcgtccagggttttgatgcgtcaggacctgatgcgtcagcaggctctggaggaggagcag
aaggaggcgcagcagcagctcctccgctcagccgactcctcttcccccatctctgtgtct
gtgtcgtcctcctgcagacctcctgctcaggtccctgtggaggtgctcaaggtgcagact
cacctggagaaccccaccaggtatcacatccagcaggctcagaggcagcaggtgcgtcag
tacctctccaccaagacagccaatcaggagccagctggaccatcgccaagccactccccc
cagctaggctccgcccccggactacagccatcagacggcaaacaggaaatggaggagact
gtcattgatgacatcatcagcctggagtcaagtctgaatgatgaatttctgacactgatc
gactctggactgcagctcgccaacacgctgccagtgtcagggaccatgctggacatgtac
ggtggcagcggagggatggccacgcccaccatcaccgttagcaacagctgcccggccgag
ctgcacgccgtcaagagagagctgagcgatgtggaaactaaagctctgatcaaagagaga
cagaagaaggacaaccacaacctcatcgagaggaggaggaggttcaacatcaacgatcgg
atcaaagaactcggagcactcatccccaaatccaccgacctggagatgaggtggaacaaa
gggacgatcctgaaggcgtcggtggattacattcgcaaattgcagaaagaacagcagaga
gcccgagagatggaggagagacagaggaggctggagaacaccaaccgctccctgctgctc
cgcattcaggagctggagcttcaggctcgtttccatggcctctcctcctcctcctcacct
cctcccacctcctcctcctcctctctggacccccaaaccctgctctcccccacattgcct
caccccttctcctcctcctccccctccctagcgactccctccctgggcctggacgccctg
agcttcgtggagctggatgagcctcggggagcctccaccgtcttctccccggacctgatg
tccgatgtggggctgacggagcttcacgtcctgggagacatcctgatggaggcggaggga
ggagggggaggaggagtgatgtccgatcccctgctgtcctgcggagcctcaaagaccagc
agccggaggagcagcttcagcatggacgaggacctctga
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