Lates calcarifer (barramundi perch): 108892833
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Entry
108892833 CDS
T04895
Name
(RefSeq) cystathionine beta-synthase a
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00260
Glycine, serine and threonine metabolism
lcf00270
Cysteine and methionine metabolism
lcf01100
Metabolic pathways
lcf01230
Biosynthesis of amino acids
Module
lcf_M00035
Methionine degradation
lcf_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
108892833
00270 Cysteine and methionine metabolism
108892833
Enzymes [BR:
lcf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
108892833
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GFIT
Motif
Pfam:
PALP
CBS
Methyltransf_12
Glyco_tran_WecG
Motif
Other DBs
NCBI-GeneID:
108892833
NCBI-ProteinID:
XP_018546094
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Position
LG7_2:complement(5513243..5522382)
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AA seq
590 aa
AA seq
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MPSVPSSKETTVNGPVCPHAAKLHNHTNGEAKLREASFPLNGVEKMPAVVDTEEASRTIQ
INTKSPSPERKWIRPDLPSRCKWSLGASKAESPHTRVPRSVAPAILPNILHRIGDTPLVR
INKIPKAFGLKCEILAKCEFFNAGGSVKDRISLRMVEDAERAGILKPGDTIIEPTSGNTG
IGLALAAAVKGYRCIIVMPEKMSMEKVDVLRALGAEIVRTPTSARFDSPESHVGVAWRLK
NEIPNSHILDQYRNPSNPLAHYDTTAEEILEQCDGKVDMLVAGAGTGGTITGIARKLKER
CPNIKIVGVDPEGSILAEPEDLNKTDKTQYEVEGIGYDFIPTVLDRSVIDMWYKSNDEES
FNMSRMLIREEGLLCGGSSGTAMAAAVNVARELKEGQRCVVILPDSIRNYMSKFLSDKWM
VNKGFLREEDLMVKKPWWWNLKLQGLNLSAPLTVLPTVSCQKTIKILKEKGFDQAPVVDE
AGLILGMVTLGNMLASILAGKIKLSDPVSKVLYKQFKQIRLTDNLGKLSRILETDHFALV
VHEQIQYLTDGSPSLKQMVFGVVTAVDLLNFVTGREKRERSMSESTDELF
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctgttccctcatccaaagagaccactgtcaatggccccgtgtgccctcacgct
gccaaactgcacaaccacaccaacggagaagccaaactccgggaggcttcgttcccactg
aatggggttgaaaagatgcccgcggtggtggacaccgaggaggcgagcaggaccattcag
atcaacacaaagagcccttctcccgagaggaaatggatccggcctgaccttcccagccgc
tgcaaatggagcctgggagcctcaaaagccgagtctcctcacacacgagttccaaggtct
gttgccccagccattcttccgaacatcctgcataggattggtgacactcccttggtgcgc
atcaacaagatcccgaaagcatttggactcaaatgtgaaatcttggccaaatgtgagttc
ttcaacgccggcggcagcgtcaaagacaggatcagcctgcggatggtggaggatgctgag
agagccggaattcttaagcctggagacacaattatagagcccacatctggaaacactgga
attggattggccctggctgcagctgtgaaaggctaccgctgcatcatagtcatgcctgag
aaaatgagtatggagaaggtggatgttctgagagccctcggagccgagatcgtccgcacg
cccactagcgctcgcttcgactcgccagagtctcacgtgggcgtcgcctggcgcctcaag
aacgagatccccaactcccacatcctggatcagtaccgcaacccgagcaatccactggct
cactacgacaccacagccgaagagatcctggagcagtgcgacggtaaggtggacatgctc
gtggcaggagcaggcacagggggaacaattacaggtatcgcccggaaactgaaggaaaga
tgccctaacatcaagattgttggtgttgacccagagggctccatcctggctgagcctgag
gatcttaacaagaccgataagacccagtacgaggtagagggcattgggtacgacttcatc
cccaccgtgctcgacagatcagtaattgatatgtggtacaagtccaatgatgaggagtcc
ttcaacatgtctcgtatgctgatcagagaggagggcttgctgtgcggaggcagctcagga
acggccatggctgcagccgtgaacgtcgccagagagctgaaggagggccagcgctgtgtc
gtcatcttgcccgactccatccgcaactatatgtccaagttcctgagtgataagtggatg
gtaaataagggcttcctgagggaggaggacctcatggtgaagaaaccatggtggtggaac
ctgaagctgcagggtttgaacctgtcggcccccctcaccgtcctgccaaccgtcagctgc
cagaagaccatcaaaatcctcaaggagaagggcttcgaccaggcgcctgtagtggacgag
gctgggttaatcctgggcatggtgactctggggaacatgctggcctcgattctggcaggg
aagatcaagctgtcagacccggtcagcaaagtgctctacaagcagttcaaacagatccgt
ctgactgataacttgggaaagttatcccgcattctggagactgaccactttgccctggtg
gtacatgaacagatccagtacttaacagacggctctcccagtttgaagcagatggttttc
ggtgtggtgacagccgtcgacctactcaactttgttacagggcgggaaaagagagagcga
tccatgtcggaatcgactgacgagctgttctaa
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