Lates calcarifer (barramundi perch): 108893522
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Entry
108893522 CDS
T04895
Name
(RefSeq) extracellular calcium-sensing receptor
KO
K04612
calcium-sensing receptor
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
108893522
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108893522
G protein-coupled receptors [BR:
lcf04030
]
Metabotropic glutamate receptor family
Calcium-sensing
108893522
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
7tm_3
NCD3G
Peripla_BP_6
Ephrin_rec_like
Motif
Other DBs
NCBI-GeneID:
108893522
NCBI-ProteinID:
XP_018547145
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Position
LG20:13443288..13447456
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AA seq
938 aa
AA seq
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MKLVLHYLILLGSSCVISTYGPHQRAQMTGDILLGGLFPIHFGVSSKDQDLAARPESTQC
VRFNFRGFRWLQAMIFAIDEINNSSTLLPNITLGYRIFDTCNTVSKALEATLSFVAQNKI
DSLNLDEFCNCTDHIPSTIAVVGAAGSAISTAVANLLGLFYIPQISYASSSRLLSNKNQY
KSFMRTIPTDEYQATAMADIIEHFQWNWVIAVASDDDYGRPGIEKFEKEMEERDICIHLN
ELISQYFEDYEIQALADRIENSTAKVIVVFASGPDIEPLIKEMVRRNITDRIWLASEAWA
SSSLIAKPEYLDVVAGTIGFALKAGHIPGFREFLQQVQPKKDSHNEFVREFWEETFNCYL
EDSPRLQESGSTSFRPLCTGEEDITSVETPYLDYTHFRISYNVYVAVYSIAQALQDILTC
TPGHGLFANNSCADIKKMEAWQVLKQLRHLNYTNSMGIKMQFGENADLAANYTIINWHRS
AEDGSVVFEEVGYYNMHAKRGAKLFMDKTKILWNGYSSEVPFSNCSEDCEPGTRKGIIDS
MPTCCFECTECSDGEYSYHKDASVCTKCPNNSWSNGNHTFCFLKEIEFLSWTEPFGIALA
ICAVLGVFLTAFVMGVYVRFRNTPIVKASNRELSYVLLFSLMCCFSSSLIFIGEPQDWMC
RLRQPAFGISFVLCISCILVKTNRVLLVFEAKIPTSLHRKWWGLNLQFLLVFLCTFVQVM
ICVVWLYNAPPSSYRNHDIDEIIFITCNEGSVMALGFLIGYTCLLAAICFFFAFKSRKLP
ENFTEAKFITFSMLIFFIVWISFIPAYFSTYGKFVSAVEVIAILASSFGMLACIFFNKVY
IILFKPSRNTTEEVRCSTAAHAFKVAAKATLKHSTASRKKSSSIGGSSASTPSSSISLKT
NGNDCDPTSGKHKPRVSFGSGTVTLSLSFEESRRSSLM
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgaaactagttttgcattatctgatactcttggggtccagctgtgttatttcaacttat
gggcctcatcagagagcacagatgaccggtgatattttacttggaggtctgttccccata
cacttcggtgtttcatccaaagaccaggaccttgcagcccgaccagaatccacgcagtgt
gtcaggttcaatttccgtggtttccgttggctccaggccatgatttttgcaattgatgag
attaacaacagcagcacactcctgcccaacatcaccctgggctacaggatatttgacaca
tgcaacacagtgtcaaaagccctggaagccacccttagttttgtggcccagaacaagatt
gactccctgaatttagatgaattttgtaactgtactgatcacatcccatcaactattgca
gtagtaggagcagctggatctgcgatctccacagcagtcgcaaacctgctgggtctgttt
tatattcctcagatcagctatgcctcctctagtcgtttactgagcaacaagaatcagtat
aagtccttcatgagaaccattcctacagatgagtaccaggccacagccatggcagacatc
attgagcacttccagtggaactgggtcattgctgtagcctctgacgacgactatggacgc
ccagggattgaaaagtttgagaaggaaatggaagagcgtgacatctgtattcacctaaat
gaacttatttctcagtactttgaggattatgaaatccaagctctggctgacaggatcgag
aactccacagctaaagtaatcgtagtgttcgccagtggcccagatattgagcctttaatc
aaagagatggtccggaggaacatcacagatcgcatttggttagccagcgaagcatgggca
agctcctcccttatcgctaaaccagagtatcttgatgttgtggcagggactattggcttt
gctctaaaggcgggacatatacctggctttagagagttcttacaacaagtccaaccaaag
aaagacagccataatgaatttgtcagggagttctgggaggaaaccttcaactgttatctg
gaagacagcccaagactgcaagaaagcggcagcactagtttcaggcctttgtgtactggt
gaggaagacatcacgagtgttgagaccccgtacctggactacacacactttcgtatctcc
tataatgtgtatgttgcagtgtattccattgcacaggccctgcaggacatactcacctgc
actcccggacatggactctttgccaacaattcctgtgcagatataaagaaaatggaagcg
tggcaggtcctgaagcagctcagacatttgaactacaccaacagtatggggataaagatg
caatttggtgagaatgcagacctggcagcgaactacaccattataaactggcacaggtct
gctgaagatggctctgtggtgtttgaggaggtcggatactacaacatgcatgctaagaga
ggagccaaactgttcatggacaagacaaagattctgtggaatggctatagttcagaggtg
ccattctctaattgcagtgaggactgtgaacctggcacaagaaaggggatcatagatagt
atgcccacatgctgctttgaatgcactgagtgctcagatggggagtacagttatcataaa
gatgccagcgtttgtactaagtgtccaaataactcctggtctaatgggaaccacacattc
tgcttcctgaaggaaattgagtttctctcctggacagaacctttcgggatagctttggcc
atatgtgcagtactgggtgttttcttgacagcctttgtgatgggagtctatgtcagattt
cgcaacaccccaatagtgaaggcctcaaatagagaactgtcctacgtcctcctgttctca
cttatgtgttgcttctccagctctctcatcttcattggcgagccgcaggattggatgtgt
cgtttacgccaacctgcctttgggatcagctttgttctctgcatctcctgtatcctcgtg
aaaactaacagagtgcttttagtgtttgaagccaagatccctacaagtctccatcgtaaa
tggtggggattaaatctgcagtttctgttggtgtttctgtgcacatttgtccaggttatg
atatgtgtagtctggctttacaatgcccctccttccagttacaggaatcatgacatagat
gagatcatttttatcacctgtaatgaaggctctgtgatggctcttgggtttcttattggc
tatacatgtctgctagcagctatatgcttcttctttgcatttaaatcacggaaacttcca
gaaaactttacagaagctaagttcattacttttagcatgcttatattcttcattgtttgg
atctcttttatccctgcctacttcagtacttacggcaagtttgtttcagcagtggaggtc
attgcgatactggcatctagctttgggatgctggcctgtatctttttcaataaggtctac
atcatcctcttcaaaccatccaggaacaccacagaggaggtcagatgcagcactgcagcc
cacgctttcaaagtggctgccaaagctacactaaaacacagcacagcttcgagaaaaaaa
tccagcagcattggtggatcctctgcctcgactccgtcctcctccatcagcctcaagacc
aatggcaatgactgtgacccgacttcaggaaagcacaagccaagggtgagctttggaagt
ggaacagttactttatccttgagctttgaggaatcaaggaggagttctctgatgtga
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