Lates calcarifer (barramundi perch): 108894243
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Entry
108894243 CDS
T04895
Name
(RefSeq) cell migration-inducing and hyaluronan-binding protein
KO
K19031
cell migration-inducing and hyaluronan-binding protein [EC:
3.2.1.35
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lcf00536
]
108894243
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
108894243
Glycosaminoglycan binding proteins [BR:
lcf00536
]
Hyaluronan
Cell surface receptors
108894243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ILEI
G8
Mucin2_WxxW
Motif
Other DBs
NCBI-GeneID:
108894243
NCBI-ProteinID:
XP_018548353
UniProt:
A0A4W6D615
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All DBs
Position
LG2:16027143..16175579
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AA seq
1348 aa
AA seq
DB search
MKTCVMFLAALLLPCIQAVCPDKEPGLQPWMPGHSEDHRVTIGYGRKVLLTTSATVHSIE
ILNGGKLVIADTSRPILLRTKHILIGNKGELHIGSPDCPYKGNLTISLFGRLDDSDQEHS
YFGRKYIGVGTGGTLEIHGEKKLSWTFLNKTLHPGESNQNNYLFQRSWGNRGIIIHVIDP
KTGEVLHDDRFDTYRSKDESYRLAKYVDSVDAGLILAMVVNDEGSNNLEDSAKKSLSKLG
SRHISSLGFRHPWTFIVTKGDTSSVVEDHAVYQGTKASSEARSSRVFSSSYGEHFTITTS
SQWVQEAEWTEWFDRDDERGSGDWEKLSDLHEAYPDRLCGSPLDIQAETHDGIPSNQTGD
VIHKNDKDYGFVCLNKDQAHGLCRNYRVRFLCGKLVRPQASISIDISSNSSILELADQPE
GWRSGDRVVVASTDYSMHQAEEFTLLPCPTCTSNQVKVQGKAQFIHMGEEVDGVDMRAEV
GLLSRSILLRGEMEPGCYGNEACKFFDFDTFGGHLKVERGFGAVHISGMELQHMGQQTMG
HYPVHFHMNGDVDERGGYNPPTFVRDLSIHHSFSRCLTIHGSNGLLVKDVVGYDTLGHCF
FTEDGPEERNTFDHCLGLMVRAGTLLPSDRDSKMCRDITEGAYPGYVANPRQDCSATSTF
WIANPNNNLINCAAAGSEETGFWFIFHHVPTGPSEGLYSPGHTEHTPMGQFTNNRAHSNY
RAGMILDNGVKTTQANDKDKRPFLSLIGARYGPHQDADPFKPRVPALIHHFVAYKNQDHG
AWLRGGDIWLDDCQFADNGIGLTLASGGTFPDDDGSRQQVKNSLFVGESDNRGMPLPDNR
IWGPGGSDLTDRTLPRGVDFPIRGMQIYDGPIKVQNCTFRKYTALDGRHTSAFGFRLNNS
WQSCPNNNVTDITFDHVPITSRVFFGEPGPWFNKMQMDGDKTTIFHDIDGSVSEYPGAFL
VKEDNWLLRHPDCIDVPDWKAAICSGHYAQIYVQIRNPANLNMHLVRDEYPDRPLTLEGA
LGKRKHYQQFQPVITLAKGYTMHWDQAAPAEVTIWLINFNKNDWINMGLCYPQGTTFTVI
SDIHNRLTKQTRKTGVFMRTTQREKVNHSHQTRGYYYLEEDTGLLFLKVKAHNDREQFAF
CSVKGCERVKITAVIPKDSPPSNCMAEAYPRHAELPVVDVPMPRKIPNARLHSTEHFLEV
KLESYNTRFFHIKEDFAFIEVNGRKLYQAEDGVQLTVIDGHDGKVVETKTFRNAILQGIP
AQIGNYVSGLRDGSIVLMTSKGRLVTRGPWTKVLERLGADKSIKLKEKLAFVGFKGSFYP
DWVHLEVDADRAKIHQVLPVPVVHKMKL
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgaagacatgtgtcatgtttctggcagctctgctgctcccctgcatccaagcagtgtgt
ccagataaagaaccaggactgcagccatggatgcccggacacagtgaagaccaccgtgtt
acaatcggttatggcaggaaagtcctcctcaccacctcagccacggtccactccattgag
attctcaacggtggaaagttggtgattgctgacaccagtcggcccatactgctgcgaaca
aaacacatcctgattggaaacaaaggggagctacacatcggaagcccagactgtccttat
aaaggcaacctcaccatctccctctttggaagattggatgacagtgatcaggagcacagc
tactttgggaggaagtacatcggtgtggggacaggagggacgctggagatccacggagag
aagaagctgtcgtggacgttcctaaacaagactctccaccctggagaaagcaaccagaac
aactacctgttccagagaagctgggggaaccgaggcatcatcatccacgtcatcgatccc
aagactggagaggtgctgcacgatgacaggtttgacacataccgcagtaaggatgagagt
tatcgccttgctaagtatgtggatagtgtggacgccgggctcattctggccatggtggtc
aatgacgagggctccaacaacttggaggattctgccaagaaaagcctctccaagctgggc
agccggcacatcagcagtctgggatttcggcatccctggacttttattgtgacaaaaggt
gacacttcttcggtggtggaggatcacgctgtctatcaagggaccaaggcctcctcagaa
gcccggagctctcgtgtgttttcgtccagttatggcgagcattttaccatcaccaccagc
agccagtgggtgcaagaggctgagtggacagaatggttcgacagggatgatgagagagga
tctggagactgggagaaactgtcagacctgcacgaggcctatccagacagactgtgtggc
agtccactggacatccaggccgaaacccacgacggcataccatccaaccaaacaggagat
gtgatccacaagaacgacaaggactacggcttcgtctgcctcaacaaggaccaggctcac
ggcctctgtcgcaactacagagtccgtttcctctgtggaaaactggttcgtccacaggcc
tccatttccatcgatatctcatccaacagcagcatcctggagcttgctgaccaaccggag
ggctggcggtcaggggatcgggtggtagtggcaagtacagactactccatgcatcaggct
gaggagttcaccctgctgccctgccctacatgcacatccaaccaggtcaaggtccaaggt
aaggcccagttcatccacatgggagaggaggtggacggggtggatatgagggcagaagtc
ggcctgctgagtcgtagcatcctgctccgtggcgagatggagcccggctgctacggcaac
gaggcctgcaaattcttcgactttgacacgttcggtggacatttaaaggtggagcggggc
tttggggcggttcatatatctgggatggagctgcagcacatgggccagcagacaatggga
cactacccggtccatttccatatgaatggagacgtggacgagaggggaggctacaacccc
cccaccttcgtcagggatctgtccatccaccactccttctcccgctgtttaaccatccat
ggctccaatggtttactggtaaaggacgtggtgggctatgacacactgggtcactgtttc
ttcactgaggacggtccagaagagaggaacacgtttgaccactgtctgggtctgatggtg
cgagcggggactctgctgccctcagacagagacagcaaaatgtgccgcgacatcactgag
ggagcttaccctggatacgtggccaacccacgccaggactgcagtgcaacttcaactttc
tggatcgccaaccccaataacaacctcatcaactgtgctgctgcaggctcagaggaaaca
ggtttctggttcatcttccaccatgtgcccaccggcccctcagaggggctgtactccccc
ggacacactgaacacacacctatgggccagttcaccaacaacagagcccattcgaactac
agggctggaatgattcttgataacggagttaaaaccacccaggctaacgacaaggacaag
agacccttcttgtctctgattggagccaggtacggcccccaccaggatgctgatcccttc
aaacccagagtccctgctctgatccaccactttgtggcctacaagaaccaggaccatgga
gcctggctgagaggaggggacatctggctggatgactgccaatttgctgataatggcatt
ggcctcactctggcaagtggagggacgtttccagacgacgacggctctcgtcagcaggtg
aagaactcactgtttgttggtgaaagtgacaatcgcgggatgcccctacctgacaaccgg
atctgggggcccgggggttcagacctcaccgacaggaccctgccacgtggagttgatttt
cctatccggggcatgcagatctatgacgggcccatcaaggtgcagaactgtacatttcgg
aaatacacagccctggatggacgccacaccagcgcctttggcttcaggctcaacaactca
tggcagagctgccccaacaacaacgtcactgatatcacctttgaccacgtacctatcaca
tctcgggtgttttttggggaaccgggtccctggtttaataagatgcagatggacggggac
aagacaaccatcttccacgacattgatggctcagtcagtgaatatcctggagccttcctg
gttaaagaggataactggctgctccgtcatcccgactgcattgacgtgcctgactggaag
gctgctatctgcagcggtcactatgcacagatctatgtccagatacgaaatcctgccaac
ctgaacatgcacttagtgcgggacgagtaccctgaccggcccctgacactagagggcgct
ctagggaagagaaaacactaccagcagttccagccagtgatcacactggccaagggctac
accatgcactgggaccaggcggcgcccgctgaggtcaccatctggctcatcaacttcaac
aaaaatgactggatcaacatgggcctgtgctacccacaaggcaccaccttcaccgtcatc
tctgacatccacaaccgcctgaccaaacagacccgtaagactggtgtcttcatgaggacg
acacagagggagaaggtcaaccattcccaccagaccagaggatactactacttggaggaa
gacactggcctgctcttcctgaaggtaaaggcccacaatgacagggagcagtttgccttc
tgctccgtcaaaggctgtgagagggtgaagatcacagctgtcatccctaaagatagtcca
ccgagcaactgcatggccgaggcttaccccagacacgctgagctgcccgttgtggatgtg
cccatgcccaggaagatacctaatgccaggctgcactcaactgaacacttcctggaggtc
aaactggagtcatacaacactcgctttttccacatcaaggaggactttgcctttattgag
gtgaacggcagaaagttgtaccaagcagaagatggagtgcagctaactgtaattgatggg
catgatgggaaggtggtggagactaaaaccttcaggaacgccatcctacagggcatccct
gcacagataggtaactacgtcagtggactgagagacggttccattgtcctcatgacatcc
aagggccgtctggttaccagaggaccctggaccaaagtcctggagagacttggagcagac
aaaagcatcaaattgaaagaaaagctggcatttgtagggttcaagggctccttctacccc
gactgggtccatctggaagtggatgctgaccgagccaagatccatcaggtcctgcctgtc
cctgtggtgcacaagatgaaactatga
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integrated database retrieval system
