Lates calcarifer (barramundi perch): 108894853
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Entry
108894853 CDS
T04895
Name
(RefSeq) DNA-directed RNA polymerases I and III subunit RPAC1
KO
K03027
DNA-directed RNA polymerases I and III subunit RPAC1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03020
RNA polymerase
lcf04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108894853
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
108894853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcf03021
]
108894853
Transcription machinery [BR:
lcf03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
108894853
RNA polymerase I system
RNA polymerase I
108894853
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
108894853
NCBI-ProteinID:
XP_018548993
UniProt:
A0A4W6BJD4
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Position
LG16_LG22:complement(21395590..21402833)
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AA seq
351 aa
AA seq
DB search
MAATMKNVDEIRNRVILGEFGVKNVHTTDFPGNYPGYDDSWDMEKFQKNFRIDVVQLDES
SMEFDMVGIDAAIANAFRRILLAEVPTMAIEKVFIYNNTSIVQDEVLAHRLGLIPIKADP
RLFEYRNTGEELAEEEGSEIDTIQLQLKIKCSRNPRASKDSSDPRELYLNHMVYSRDIKW
VPIGNQADVFADSSIGPVHDDILIAQLRPGQELDILMHCVKGIGKDHAKFSPVATASYRL
LPEITLLEPVEGEKAERLKRCFSRGVIDLEDVNGKKVAKVVNSRLDTCSREVLRHDDLKN
MVKLGRVRDHFIFTVESTGILPPDVLVTEAVKVLMAKCQRFLSELDSTDME
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgaccatgaagaacgtggatgagattcggaatcgagtaatacttggagaattt
ggagtgaaaaatgttcatacgacagattttcccgggaactaccccggctatgatgactct
tgggatatggaaaaatttcaaaagaacttcagaattgacgtagtgcaactggatgagagc
agtatggagtttgacatggtggggatagacgcagctatcgccaatgccttcaggaggatc
ttactagcagaggtacctacaatggccatagagaaggtgtttatctataacaacacatcc
atcgtccaggatgaagtcctggcccacagattaggcctcatccccatcaaagctgacccc
cgcctgtttgagtacaggaacactggtgaagagttggcagaggaagaaggatcagaaata
gacacaattcaactgcagctgaagattaaatgcagcaggaaccccagagccagcaaagac
tcctctgacccacgagagctgtatctgaaccacatggtttattcaagggacataaagtgg
gtccccattgggaaccaagcagatgtgtttgcagactccagcattggacccgtacatgat
gacatcctgatagctcagctacgaccaggacaggagctggacattcttatgcactgtgtc
aaaggaattggtaaggaccatgcaaagttctctccagtggccacagccagttaccgcctt
ctgccagagatcactctcttggagccagtggagggagaaaaggcagagcgtttaaaacgc
tgcttctcacgaggagttattgacctggaagatgttaatgggaaaaaggttgcgaaagta
gtgaacagtcgcctggatacctgcagcagggaagtcctccgacatgatgacctgaagaac
atggtgaaactgggaagagtgcgagaccacttcatctttacagtggagtcgactggcatc
ctgcctccagatgttctggtcacagaggctgtcaaagtcctcatggccaagtgtcagagg
tttctcagtgaactggactctactgacatggaatga
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