Lates calcarifer (barramundi perch): 108895267
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Entry
108895267 CDS
T04895
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03015
mRNA surveillance pathway
lcf04110
Cell cycle
lcf04114
Oocyte meiosis
lcf04261
Adrenergic signaling in cardiomyocytes
lcf04350
TGF-beta signaling pathway
lcf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108895267
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108895267
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108895267
04114 Oocyte meiosis
108895267
09144 Cellular community - eukaryotes
04530 Tight junction
108895267
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108895267
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108895267
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108895267
03036 Chromosome and associated proteins [BR:
lcf03036
]
108895267
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108895267
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108895267
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108895267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
Htt_N-HEAT_1
HEAT_EZ
PDS5
Cnd1
Adaptin_N
SCD
CLASP_N
M11L
Motif
Other DBs
NCBI-GeneID:
108895267
NCBI-ProteinID:
XP_018549484
LinkDB
All DBs
Position
LG21:complement(11604877..11618425)
Genome browser
AA seq
589 aa
AA seq
DB search
MAGADGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRTELLPFLTDTIY
DEDEVLLALAEQLGNFTMLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRKISQEHS
PVDLEVHFEPLVKRLASGDWFTSRTSACGLFSVCYPRVSSTVKAEIRQHFRTLCSDDTPM
VRRAAASKLGEFAKVLELDYVKSDIISLFTALASDEQDSVRLLAVEACVSIATLLPQEDL
ETLVMPTLRQAAEDKSWRVRYMVADKFSELQKAVGPEITKNDLVPAFQNLLKDCEAEVRA
AAANKVKEFCENLPEDNREQIIMTHILPCVKELVSDTNQHVKSALASVIMGLSTILGKDN
TIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVR
LAIIEYMPLLAGQLGVEFFDEKLNTLCMAWLIDHVYAIREAATCNLMKLVEKFGAEWAQN
TIVPKVLGMANDPNYLHRMTTLFCINALSEACGQEITTKHMLPVVLKMSNDQVANVRFNV
AKSLQKIGPVLDSNALQTEVKPVLEKLASDTDMDVKYFAQEAISVLALA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagctgatggagacgactctctttaccctatcgccgttctcattgatgaactg
cgaaatgaggacgttcagttacgactgaacagcatcaagaagctgtcaacaattgctctg
gcccttggagtggagaggacccgcactgagctccttcccttcctcacagacaccatctat
gatgaagatgaagtgctcttggccttggctgagcagcttggcaatttcactatgttggta
ggagggccggagtatgtgcactgtctcctgcctcctctcgagagcctcgctacagtggaa
gaaacagtagtcagagacaaagctgtggagtcgctgcggaagatctctcaggagcactct
ccagttgacctggaagtccactttgagcctttggtcaagcggctggccagtggtgactgg
ttcacttctcgcacatctgcctgcggcctctttagtgtctgttatccccgtgtctccagc
actgtcaaggctgagatccgccagcatttccgcaccttgtgttcagatgacactcccatg
gtgcgtcgtgctgcagcatctaagctgggggagtttgccaaagtgttggagcttgattat
gtaaaaagtgacattatttccctcttcactgctctggcctctgacgagcaggactcagtg
cggctgcttgcagtggaggcttgtgtcagcatagccactctgctgcctcaagaggacctg
gagaccttggtgatgccaaccctgcgccaggctgcagaggacaaatcctggagggtccgc
tacatggtggctgacaagttctctgagctccagaaagcagtggggccagagatcaccaag
aacgatcttgtcccagccttccagaatctcctgaaggactgtgaagctgaggtccgtgct
gctgcagccaacaaagtgaaagaattctgtgagaacctcccagaggataatcgtgagcaa
atcatcatgactcacattctgccctgcgtcaaggaacttgtttcagacaccaaccagcat
gtgaagtcagccctggcctcagtcattatgggcctttcgaccatcctgggcaaggacaac
acaatagagcacttactgcctctcttcctggctcagctcaaggacgagtgccctgaggtg
cgtctcaacatcatctccaacctagactgtgtgaacgaggtgattggcatccgtcagctc
tcccagtctctgctgccggccattgtggagctggcagaggatgcaaagtggagggttcgc
cttgctataatagagtacatgcccctgttggcaggacagctgggagtggaattcttcgac
gagaagctcaacaccctctgtatggcctggcttattgaccacgtgtatgccatccgtgag
gcggccacctgtaatctaatgaagctggtggaaaagtttggtgccgagtgggctcagaac
accattgtacccaaagtgctgggcatggccaacgaccccaattacctccacaggatgacc
actctgttctgtatcaatgctttgtcagaggcatgtggccaggagatcaccactaagcac
atgctaccagtggtcctcaagatgtccaatgaccaggtggccaacgtacgcttcaatgtg
gccaagtcccttcagaagattggccccgtccttgacagcaatgcccttcaaacagaggtg
aagccagtgctggagaagctggcctcagacacagacatggatgtcaagtactttgcccag
gaggccatcagtgttctggccctagcataa
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