Lates calcarifer (barramundi perch): 108895487
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Entry
108895487 CDS
T04895
Name
(RefSeq) aryl hydrocarbon receptor-like
KO
K09093
aryl hydrocarbon receptor
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108895487
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108895487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
PAS_9
PAS_4
Ifi-6-16
Motif
Other DBs
NCBI-GeneID:
108895487
NCBI-ProteinID:
XP_018549845
UniProt:
A0A4W6CXH1
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Position
LG9:19206596..19227971
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AA seq
945 aa
AA seq
DB search
MPSATMQGNGGVYAVKKRKKPVQKVAKPPPLKTNPSKRHRDRLNVELDHLTSLLPFSEEV
RGRLDKLSVLRLSVGYLKVKSYFHVALQRNGTFARVASANGRNGQSVSLDGVSFSEGELL
LQALNGFVLVVTTDGTIFYTSPTTHDFLGFHQSDVVHQSVYDLIHMDDREMFRCQLHFAL
NPSKSDTDMRAEDGQCSSKTLSSSQSFLPQYLPPENSSFLERSFCCRLRCLLDNTSGFLA
LNFTGRLKYLHLQGTAGADGTVAPPQLALFAIATPVQSPSVTEIRTKTLIFQTKHRMDFA
PVGIDTRGKLVLGYTEVELVTTGSGYQFIHAADMMYCADNHLKMIKTGDSGFTFFRLLTK
TGHWLWVQASARIVFKEGRPDFIIARQKALTNEEGEEHLRQRRQQLPFSVATGEGVLYDV
SLDVFSISGPSGPAESTTEKPLDPASLLGSLRRQDHSLYTQPEMPSPQFPIFSQTEDTDC
EQAQSALEQAFMDSHALLSVPGQIQTLQKRYLKVDSTSEAMMDSLGQILGDIEDGGIEGL
EVEEMELKDWENTLLRMNKEKEDAERELNRTLANDVFSYVEEALRRETGGVVVEGSDQTG
CHVSGTINSLSIQGERPGFSNNERQSRTDMTSNQSGSGEQAQLGNIHGDASNSTGLNAAS
QTTSTQTPTQCRNSHHAHTSSLWPPSSSNHRCGNEMISTPSCLTRQCWPPSAPNLNNTHS
SHQSGLEAMDQSVEYSLNHTGSQQTYVGRQPQIPSVWQQQQQLPQSFHHHTLSHSSHTQS
SVNSTAQSFQTQPLSGSCMYEKIEGRIPSAATVSTRQNRLLLGPSHSRGPTHVAGTTTNG
PPFTLSNPGMAAAGINQGTMTSQSTHMAACTDMGNISLGHLSGNDANVGTLGSEYPPENA
SLQSSFFCWNSEAQIPKVPLSDVVDPFAFPALPTGSINLSQNTRP
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcgccaccatgcaggggaacggtggagtatacgcagtgaagaagaggaagaag
cccgttcagaaagttgcgaagcctccaccgttgaagaccaatccgtccaaacggcaccgg
gaccgcctgaatgtagagctggaccatctgaccagcctgctgcctttctctgaggaggtc
agaggtcgcctggacaaactgtctgtgctccggctcagtgtgggatacctcaaggttaag
agttacttccacgtggcactgcagagaaatggaacgtttgctcgtgtcgcctctgcaaac
ggcaggaatggacagtccgtgtccctggatggagtcagtttctcagagggagaactcctg
ctccaggctttgaatggttttgtgttggttgtgacgaccgatggcaccatcttctacaca
tccccgacgacccacgacttcctgggcttccatcagtcggacgtcgtccaccagagtgtg
tacgacctcatccacatggacgacagagagatgttcagatgtcagcttcacttcgccctc
aaccccagcaagtccgacacagacatgagagcagaagatgggcagtgtagcagtaaaact
ctgagcagctctcagagcttcttgcctcagtacctccctccagagaactcctctttcttg
gaaagaagcttctgctgtcgccttcgctgcctcctggacaacacctctggattcctggct
ctgaacttcactgggcgtctgaagtacctgcatttacagggaactgctggggctgatggt
actgtggctcctcctcagctggctctgttcgccattgccacacctgtacagtctccttca
gtaacggagatccgcaccaagaccctcatctttcagaccaaacaccgaatggactttgct
cctgtgggcatagacaccagggggaagctggttttgggttatacagaggtagagctggtc
acaacaggctctggttatcagttcatccatgctgctgacatgatgtactgcgcagacaac
cacctcaagatgattaaaaccggagacagtggcttcacattcttcaggctgctgactaaa
acaggacactggttgtgggttcaggcctctgccaggatagtcttcaaggaagggaggcca
gacttcatcattgctcgtcagaaagctctcacaaatgaagaaggagaggaacatttgcgc
cagagaaggcagcagctccctttcagtgttgccaccggtgaaggtgtcttgtacgacgtt
tctctggatgttttctccatctcgggtccttctggccctgctgagtctacaacagagaaa
cctctggatcctgcctcactcctgggatcccttcgccggcaggaccactctctttacacc
cagccagagatgcccagtccccagttcccaatcttctcccaaacagaggacactgattgt
gaacaagcccaatctgccttggaacaagccttcatggacagccatgctctgctcagtgtg
ccaggtcagattcagactttacagaagaggtatttgaaagtggactccacatctgaagcc
atgatggactctttggggcagattttgggagatattgaggatggagggatagagggtctt
gaggtggaggagatggagctaaaggactgggaaaacaccctcctcaggatgaataaagag
aaggaagacgcagagagggagctgaatcgcaccctggctaatgatgtgttctcatatgtg
gaggaggctctgaggagagagactggtggggttgtggttgagggttcagatcagacaggg
tgtcatgtttcgggaaccatcaacagtttatccattcaaggtgagcgtcctgggttttca
aacaatgagcggcagtcaaggacggacatgacatctaaccagagtggatctggagaacag
gctcagttgggaaatattcatggcgatgcttctaattcgaccggactgaacgctgcttct
caaacgacaagcacacaaacacccactcagtgtcgtaacagtcaccatgcacacacctct
tctctgtggcctccaagcagcagcaatcaccgctgtggtaatgaaatgatttcaacacca
tcctgtttgacgcgtcagtgttggcctccatctgcaccaaacctcaacaatactcacagc
agccatcaatctggcttggaggcaatggaccaaagtgtagaatattctctaaaccacact
ggttcacagcagacttacgtggggcgacagcctcagatcccttcagtgtggcaacagcaa
cagcagctgccacaaagttttcaccatcacacactttcacattcctcacacacacaaagc
agtgtgaactcaacagctcagtcattccaaacgcagccactatctggcagctgcatgtat
gaaaaaatagaaggtcgcataccgagtgctgctactgtttctaccagacagaacaggctt
ctcttgggaccatcgcactccaggggacccacacatgttgcagggactaccacaaatggt
ccgcccttcaccctgtcgaatccaggcatggcagctgcaggcatcaaccaggggacgatg
accagtcagagcactcacatggctgcctgtacagacatgggcaacatcagtttgggtcat
ctgagtggaaacgatgccaacgtgggaacacttggatcagaatatcctcctgaaaatgca
tcattacagtcttcattcttctgttggaacagtgaagctcagattcccaaagttcccctg
agcgacgttgtggacccgtttgccttcccggcgcttcccactgggagcatcaacctttct
cagaacaccagaccatag
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