Lates calcarifer (barramundi perch): 108897238
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Entry
108897238 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA (uracil-5-)-methyltransferase homolog B
KO
K15331
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcf03016
]
108897238
Enzymes [BR:
lcf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
108897238
Transfer RNA biogenesis [BR:
lcf03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
108897238
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
PrmA
MTS
Methyltransf_15
Ubie_methyltran
Methyltransf_11
Methyltransf_4
Cons_hypoth95
Motif
Other DBs
NCBI-GeneID:
108897238
NCBI-ProteinID:
XP_018552286
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Position
LG16_LG22:complement(9382639..9384625)
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AA seq
503 aa
AA seq
DB search
MLTTITTSLKVKMIFAATGSRSALFVKRKILLRDTCRLFSTNDVILADQGKPPSKKRWRK
SHKKLPWTDGLSWEERLADVVTPLWRLSYDEQLELKQNNQERILSQLSEHLSRDSQSSSP
VRGKLSFPVLPILPSPVRDGYRNKSTFSVNRGVDGNSKTVGFYVGTGKEGNIVCINGDHL
LNMPEKHKLVARCYQDFVRLSSLEPCLLFHTGGHWREVTVRTNKEGRTMAIVYFHPQMLT
PEEVAVHKADLVDYFTRGPGSVCQLDSLLFQESSMTRCTHEDSPYQLLHGQPHIYEEVLG
FKFRISADAFFQVNQAAAEVLYGKVRDLCVPETGESGGGTKVGGTLLDVCCGTGAIGITV
SPTVDRIIGIELIEQAVQDAKHNAALNNILNCEFVPGKAEVVLPGLMSRLSSAGGGLTAV
VNPARAGLHYRVVRALRNQPSIRRLVYVSCKPDGEAMRNFRELCCAPNLQKKLTGQAFSP
TLAVPVDMFPHTPHCELVLLFER
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgttaaccacaataactacttctttgaaagtcaaaatgattttcgcagccacaggcagc
aggtcagccctatttgtcaaacgcaaaattttgttgagggatacctgtcggttgttttca
acaaatgacgttattttagcggatcaagggaaaccaccatcgaagaaacggtggagaaaa
agtcacaagaaacttccctggactgatggtttgtcctgggaggaacggctggccgatgtg
gtcacccctctgtggagactaagctatgatgagcaacttgagctcaagcaaaataatcag
gaaaggatactgtctcagctctctgagcatctttcacgtgattcacagtcctcatcacct
gtgagaggtaaactcagtttccctgtcctacccattctgccatcgccagttagggatggc
taccgcaacaagtctacgttttctgtcaacagaggagtagatggcaattcaaagactgtt
ggattttacgtgggcacaggcaaggaggggaacattgtctgcatcaatggagaccacctg
ctcaacatgccggagaagcacaaacttgtagccagatgctaccaggactttgtgcgcctc
tcttccctggagccctgcctgctgtttcacactgggggtcactggagagaggtcacagtg
aggaccaacaaagagggccgcaccatggccatagtgtactttcatccgcagatgctcacc
ccagaagaggtggcagtccataaggctgacctggtggattacttcacgcgaggtcctgga
tcggtctgtcagctggactcactgttgttccaggagagcagcatgactcgctgcactcat
gaggactccccctaccagctcctgcatggtcagccgcacatatatgaggaggtgctgggc
ttcaagttccgcatctctgccgatgcctttttccaggtgaaccaggccgccgctgaggtg
ctctatggcaaagtgagagacctgtgcgtcccagaaactggggaaagtggtgggggaaca
aaagttggcggcactcttctagacgtgtgctgcggaacaggtgctattggcattactgta
tcccccacagtggacagaattattggtatagagctcatagaacaggcagtgcaagatgca
aaacacaatgcagctctcaacaatatactgaactgtgagtttgttcccgggaaggcagag
gtggtgctgcctggccttatgtctcggctgagctccgcaggcggaggcctcacagccgtg
gtaaaccctgctcgggctggcctgcattacagagtggtcagagctttacgaaaccaaccc
tccattcgccggctggtctatgtttcctgtaagccagatggagaggctatgaggaacttc
agggagctttgctgtgcacccaacctgcagaaaaaactcacaggacaagcattctctcca
actctggctgtgcctgtggacatgttcccacatactcctcactgtgaactggtgctactt
tttgagaggtag
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