Lates calcarifer (barramundi perch): 108897326
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Entry
108897326 CDS
T04895
Name
(RefSeq) cGMP-dependent protein kinase 1 isoform X1
KO
K07376
cGMP-dependent protein kinase 1 [EC:
2.7.11.12
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04270
Vascular smooth muscle contraction
lcf04540
Gap junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
108897326
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
108897326
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcf01001
]
108897326
Enzymes [BR:
lcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.12 cGMP-dependent protein kinase
108897326
Protein kinases [BR:
lcf01001
]
Serine/threonine kinases: AGC group
PKG family
108897326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
cNMP_binding
PK_Tyr_Ser-Thr
PKcGMP_CC
Kinase-like
Med28
Med4
DUF641
APH
Motif
Other DBs
NCBI-GeneID:
108897326
NCBI-ProteinID:
XP_018552412
LinkDB
All DBs
Position
LG16_LG22:complement(10468734..10545034)
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AA seq
719 aa
AA seq
DB search
MPDKVYEQRGRGVATGSAAYLSINLLGSRSSPPAEMGTLRDLQYALQEKIEELRQRDALI
DELELELDQKDELIQRLQNELDKYRSVIKPATQQVHKQNELNEQQRTKRQAISAEPTAFD
IQDLSHVTLPFYPKSPQSKDLIKEAILDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIK
EGDVGSLVYVMEDGKVEVTKESLKLCTMGPGKVFGELAILYNCTRTATVKTLTNVKLWAI
DRQCFQTIMMRTGLIKHTEYMEFLKSVPTFHGLQEDILSKLADVLEETHYEDGEYIIRQG
ARGDTFFIISKGKVNVTREDLPNGEPVYLRSLGKGDWFGEKALQGEDIRTANVIAAEAVT
CLVIDRDSFKHLIGGLEDVSSKGHEDADAKAKYEAENAFFFNLNLADFNIIDTLGVGGFG
RVELVQLKSDENKTFAMKILKKRHIVDTRQQEHIRSEKLIMQEAHSDFIVRLYRTFKDSK
YLYMLMEACLGGELWTILRDRGSFEDSTTRFYTACVVEAFAYLHSKGIIYRDLKPENLIL
DHRGYAKLVDFGFAKKIGFGKKTWTFCGTPEYVAPEIILNKGHDISADYWSLGILMFELL
TGSPPFSGPDPMKTYNIILRGIDMIEFPKKITKNAANLIKKLCRDNPSERLGNLKNGVKD
IQKHKWFEGFNWEGLKKGTLTPPIIPNVTSAVDTSNFDSFPEDNEDPPPDDNSGWDVDF
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgccggataaagtttatgagcagcgtggtagaggagtggctacaggctcggctgcatac
ctttcgataaacttattgggaagtcgctcgtcgccgccagctgaaatgggcaccttgcgc
gacctccagtacgcgctacaggagaagattgaggagctgcgccagagggacgcgctcatc
gacgagctggaactggagctcgaccagaaagacgagctcatacagaggctacagaacgag
ctggacaaataccgctccgttatcaaaccggcaacccagcaggtccacaagcagaacgag
ctgaacgagcagcagcggacaaagaggcaggcgatttcggccgaacccactgccttcgac
atccaggatcttagccatgtcaccctacctttctaccccaaaagcccacagtccaaggat
ctgatcaaggaagccatcttggacaatgacttcatgaagaacctggagctgtcgcagatc
caagagattgtggactgcatgtaccctgtggagtatgggaaagacagctgtatcattaag
gagggcgatgtgggctcactggtctacgtcatggaagacgggaaggtggaggtgacgaag
gagagcctgaagctctgcaccatggggccaggaaaggtgtttggagagctggctattctc
tacaactgcaccaggactgccactgtcaagactctaacaaatgtgaagctgtgggccatc
gaccgacaatgttttcagactatcatgatgaggacgggtctcatcaagcacacagagtat
atggagttcctgaaaagcgtccccacattccacggtctgcaggaggatattctgagcaag
cttgccgatgtccttgaggagacacattatgaagacggagagtacatcatcagacagggg
gccagaggagacaccttcttcatcatcagtaagggaaaggttaatgtgaccagggaagat
ttgcccaatggagagcctgtctacctgcgcagtcttggaaaaggcgactggtttggagag
aaagcactgcaaggggaggacatcaggacagccaacgtcattgcagcagaggccgtcacc
tgtttagtaatcgatagagattcattcaagcacctgattggaggtttggaggatgtgtcc
agtaagggtcatgaggatgctgatgccaaagccaagtatgaagcagagaatgcgtttttc
ttcaatctgaacctagctgacttcaacatcatcgacactctgggggttggtggctttgga
cgtgttgagctggttcagctcaagagtgacgagaacaaaacctttgccatgaagatcttg
aagaagcggcacatagtcgacacaagacagcaggagcacattcgttcagagaaactcatc
atgcaggaggcccactctgacttcattgttagactctatagaaccttcaaggacagcaag
tacctctacatgttaatggaggcatgtttaggaggagagctgtggaccattcttcgagac
cggggttcctttgaggactcaaccaccaggttttacacagcttgtgtggtagaggccttt
gcctacctgcattccaaaggaatcatctacagggacctcaaaccagagaaccttatattg
gaccacagggggtatgccaaactggtggactttggctttgccaagaagattggatttgga
aagaagacatggaccttctgtgggacgccggagtatgtagcaccagagatcattctgaac
aagggccacgacatctcagctgactactggtccctaggaatcctcatgtttgaactctta
actggcagccctccattctctggccctgatcctatgaaaacctacaacatcatcctgaga
ggcattgacatgatcgaatttccaaagaaaattaccaaaaatgctgccaacctaatcaaa
aagctatgcagggataatccttctgaaagactgggaaacttgaaaaatggtgtcaaagac
atccaaaagcacaaatggtttgagggctttaattgggagggcttgaagaaggggacactg
acgcctcctattatccctaatgtcacatcagcagtcgacacaagtaactttgacagcttc
ccagaggacaacgaggacccgcctcctgatgacaactccggctgggatgttgatttttga
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