Lates calcarifer (barramundi perch): 108897495
Help
Entry
108897495 CDS
T04895
Name
(RefSeq) carbohydrate sulfotransferase 11 isoform X1
KO
K01017
chondroitin 4-sulfotransferase 11 [EC:
2.8.2.5
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
108897495
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108897495
Enzymes [BR:
lcf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.5 chondroitin 4-sulfotransferase
108897495
Glycosyltransferases [BR:
lcf01003
]
Unclassified
Sulfotransferases
108897495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sulfotransfer_2
HEPN_STY4199
Motif
Other DBs
NCBI-GeneID:
108897495
NCBI-ProteinID:
XP_018552677
UniProt:
A0A4W6ELL7
LinkDB
All DBs
Position
LG18:16860751..16932970
Genome browser
AA seq
352 aa
AA seq
DB search
MKQTLSELMRMSRICRMVFATCLGSFILVIFYFQSMFQPVMRRNPFMVDGCCRKGSRNAL
QELYNPTQPELSGAAVLHQARRDQVVDACRVYSASSRKRRVLTPGDLKHLVVDEDHELIY
CYVPKVACTNWKRVMMVLTGRGKYSDPMEIPSNEAHVPSNLKTLNQYSIAEINHRLKNYL
KFLFVREPFERLVSAYRNKFTLKYNSSFHKRFGTRIVRRYRKNATQDALLNGADVKFKEF
AEYLVDPATQRDGPLNEHWQTVYQLCHPCHIHYDLVGKYETLEEDANYVLRLVGVGDSLH
FPSYAKSTRTTDAMTAQFFSNISTQQQIQLYQLYKLDFLMFNYSTPSYLRLD
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagactctgagcgaactgatgaggatgagcaggatatgccggatggtatttgcc
acttgtttgggatcctttattctggtcatcttttatttccaaagtatgttccaaccagtc
atgcgcaggaaccccttcatggtggatggctgctgtaggaaaggatcccgcaatgccctg
caggagctctacaaccccacacagccggagttgtccggagctgccgtcctccaccaggcc
aggagggatcaggtagtggatgcctgtcgagtctacagcgcatctagccgtaaacggcga
gtcctgacaccaggagacctcaaacaccttgtggtggatgaggaccatgagctcatctac
tgctatgtccccaaggtggcctgtaccaactggaaacgtgtcatgatggtgctcacaggt
cggggcaaatatagtgaccccatggaaatcccttccaatgaagcccatgttccatccaac
ctgaagacgctgaaccagtacagcattgccgagattaaccatcgcctcaagaactacctc
aagttcctctttgttcgtgagccctttgagaggctggtttctgcataccgcaacaaattc
accctcaagtacaactcgtccttccataagcgctttggcacccgtatagtccggcgctac
cgcaagaacgccacacaggatgccctgctcaatggtgctgatgtcaaatttaaggaattc
gcggagtacctggtggaccctgccacgcagcgtgatggcccactcaacgagcactggcag
actgtctaccagctttgccacccatgtcacatccactatgacctggtgggcaagtacgag
acactggaggaggatgcaaactacgtgttgcggctggtgggtgttggcgactccctgcac
ttcccaagctacgccaagtccactcgtaccacagatgccatgacagcccagttctttagc
aatatcagcactcaacagcagatccaactctaccagctttacaagttggacttcctcatg
ttcaactactccacacccagctacctccggctggactaa
DBGET
integrated database retrieval system
