Lates calcarifer (barramundi perch): 108898011
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Entry
108898011 CDS
T04895
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00280
Valine, leucine and isoleucine degradation
lcf00650
Butanoate metabolism
lcf01100
Metabolic pathways
lcf04146
Peroxisome
Module
lcf_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
108898011
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
108898011
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108898011
Enzymes [BR:
lcf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
108898011
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Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
108898011
NCBI-ProteinID:
XP_018553363
UniProt:
A0A4W6DRA4
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Position
LG19:complement(7737452..7740546)
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AA seq
337 aa
AA seq
DB search
MAAIGRLINRNTLNLAMGQQYVAFSSAAKGRTAGVRTGRALPQKVKIVEVGPRDGLQNEK
TIVPTETKIHLIDLLSESGLPVIEATSFVSPKWVPQMADQVEVMKGICRKPGVSYPVLTP
NLKGFQAAVKAGASEVAIFGAASELFSKKNINCSVDESLQRFDEVMKAAKEAGVPVRGYV
SCVLGCPYEGKVAPEKVAHVAKRLYSMGCYEISLGDTIGVGTPGSMTEMLEVVSREVPVS
ALAVHCHDTYGQALANILVALQMGISVVDSSVAGLGGCPYAQGASGNVATEDVVYMLHGL
GIQTGVDLSKLMNAGSFICRSLNRKTSSKVAQATCKL
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggcggccatcgggaggctaataaacagaaacactttaaacctagcaatgggtcagcag
tatgtggcgttcagctccgctgcaaaaggcagaacagctggcgtaagaacaggtcgtgct
cttccacagaaggtgaaaatagtggaggtgggacccagagatggccttcagaatgagaag
accatcgtaccaacagagacaaaaattcatttgattgacctgttgtcagagtccgggctg
ccagtgattgaggccaccagctttgtgtccccaaaatgggttccacagatggcggaccag
gtggaggttatgaaggggatctgtagaaaacctggtgtgtcttatccagtccttacccca
aacctcaaaggtttccaggctgctgtgaaggcaggagcttcagaggtagccatattcggc
gctgcatctgagcttttcagtaagaagaacataaactgctctgtggatgagagtttacag
cgctttgatgaggttatgaaagcagctaaagaggctggtgtgccagttagaggatacgtg
tcttgtgttcttggatgtccgtacgaaggcaaagtagcccctgaaaaagttgcacatgta
gcgaagcgtctgtactcgatgggctgttatgagatctccctgggtgacaccatcggggtg
gggactccaggtagcatgactgaaatgttggaggtggtgagcagagaggtgccagtcagt
gccctggcagtgcactgccatgatacctatggtcaagccctggcaaacatccttgtagcc
ttacagatgggaatcagtgtggtagactcatcagtagctggactgggtggctgtccctat
gcccagggggcttctgggaatgttgctactgaagatgtagtgtatatgttacatggactt
gggattcaaacaggagtggacctctccaagctgatgaacgctggatctttcatctgtcga
agtctcaacagaaagaccagctccaaagtggcacaggccacctgcaaactgtag
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