Lates calcarifer (barramundi perch): 108898777
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Entry
108898777 CDS
T04895
Symbol
trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcf03016
]
108898777 (trdmt1)
Enzymes [BR:
lcf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
108898777 (trdmt1)
Transfer RNA biogenesis [BR:
lcf03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
108898777 (trdmt1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-GeneID:
108898777
NCBI-ProteinID:
XP_018554331
UniProt:
A0A4W6F1T0
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Position
LG24:complement(6767609..6774359)
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AA seq
385 aa
AA seq
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MENLRVLELYSGIGGMHYALHESGIPGQVVAAVDINTTANQIYGHNFPDTPLWNKTIEGI
TLDDFNKLSFDMILMSPPCQPFTRIGLQGDVRDPRTKSFLYILSLLPRLSKLPRFILLEN
VKGFECSSARELLVKTLVECGYTFQEIMVSPTSVGIPNSRLRYFLIAKIATENLCTLTSS
KILDAFPHSSESDSSEQPTVLSPTRPGTCQPEEEKQESPVLYKLETTTDAQRKKIQNSNL
SVRQIQEFLEPQDEVDLEHYLLPPKILLRYALLLDIVQPTCRRSVCFTKGYGRYVEGTGS
VLQCCMETEMESVFTGLDQHSEEEKLQQLLKLKLRYFTPREVANLMGFPQSFSFPGKIST
KQQYKVLGNSLNVVVVARLLQLLVS
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggagaatctgcgggtgctcgagctttacagtgggataggagggatgcattatgcttta
catgagagtggcatacctggccaggtggtggctgctgtcgacataaacaccacagccaat
cagatctacggacataatttccctgacacccccctctggaacaagaccattgaggggata
acgctagatgacttcaataaattatcttttgacatgattttgatgagccctccttgccag
cctttcaccaggataggacttcagggtgacgttcgtgaccccagaaccaagagcttcctc
tacatcctcagtcttctgccaaggctaagcaagctgccccgcttcatcctactggagaac
gtgaaaggctttgagtgctcctctgccagggaacttttggtgaaaacactggtggaatgc
ggatatactttccaggagataatggtctcacccacaagtgttgggatcccaaattcaaga
ctgcgttatttcctgattgctaagattgcaacagaaaacctgtgcaccctgacaagttca
aagattttagatgccttcccacattcttctgagagtgattcctccgagcagcccacagtg
ttgagtcctacccgcccaggtacctgccagccagaagaggaaaagcaggagagtcctgtc
ctgtataaactagagacaacaactgatgcacagaggaagaagattcagaacagcaatctg
tctgtgaggcagatccaagagttcctggaaccacaggatgaagtagacctggaacattat
ctccttcctccgaaaatactgctgcgatatgctctactcttagacattgttcagcccaca
tgtaggaggtctgtctgctttaccaaaggctatggacgatatgtggagggaaccggctca
gtgcttcagtgctgtatggaaacagagatggagagtgtgtttactggtctggaccagcac
tctgaagaagaaaaactccagcagctgttaaaactgaagctccgttattttactcctaga
gaagttgccaacctcatgggtttccctcagagcttctcctttcctgggaaaatctctacc
aagcaacagtacaaagttctaggaaacagcctgaatgttgtggtggtggccagactctta
caactgctggtctcttag
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