Lates calcarifer (barramundi perch): 108898805
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Entry
108898805 CDS
T04895
Symbol
slc6a4a
Name
(RefSeq) solute carrier family 6 member 4a
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108898805 (slc6a4a)
Transporters [BR:
lcf02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
108898805 (slc6a4a)
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
108898805
NCBI-ProteinID:
XP_018554376
UniProt:
A0A4W6CR24
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Position
LG21:complement(3873046..3896441)
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AA seq
674 aa
AA seq
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METKDMMMTSMLTMDKGENEGERDKGREEMGGEEEGTQQENGRLMLADGLAEKGPKSLTT
GSGQQVSNGFTSSTPQSPRDGPGTAACSGGTASGPGGGAGSSMPLGGLRTLVVQQTSLER
PRETWSKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLFPYLLMAVFGGVPLFYMEL
ALGQFHRSGCISIWKHICPIFKGIGFAICIIALYIAFYYNTIMAWALYYLLSSFGSTLPW
TTCTNSWNTANCNRYMSTDHNVSWSNSSTSPAEEFYTRQVLQVHLSPGLHQLGSVSWQLA
LCLLFIFTIVYFSIWKGVKTSGKVVWVTATFPYLVLLILLIHGATLPGAWRGVVFYLKPD
WTKLLSTSVWIDAAAQIFFSLGPGFGVLLAFASYNPFHNNCYKDALVTSSVNCLTSFLSG
FVIFTVLGYMAEMRQQDVDAVAKDAGPSLLFIIYAEAIANMPASTFFAIIFFLMIIMLGL
DSTFAGLEGVITAMLDEFPHILGKRREWFVFGLVCVCYLGALSTLTYGGAFVVKLFEEYA
TGPAVITVVLLEVIAVSWFYGTKRFCNDIQVMLGFYPGFFWRLCWVAICPCFLLFIIISF
LAFPPEVRLFNYHYPQWTTVLGYCIGVSSFICVPAYMVYHLLNAKGTFKQRLLKSITPEP
GSVDHRDYIVTNAV
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggagacaaaagatatgatgatgacaagcatgttgacaatggacaagggggagaatgaa
ggagagagggacaaagggagggaggaaatggggggagaagaggaggggacacagcaggaa
aatggtagactgatgctggctgatggtcttgcagagaaaggacccaagagcctgaccacg
ggctctggccagcaggtgtccaatggcttcacttcatccacccctcagagccccagggac
ggaccagggaccgcagcttgctctgggggcacagcctctgggcctggaggtggcgctggg
tcctccatgccactgggaggcctcaggactctagtggtccaacaaaccagcttggagagg
cccagagaaacctggagcaagaagatggacttcttgctgtctgtgattggctacgccgtt
gacctgggaaatgtctggcgcttcccctacatctgctaccagaatggaggaggtgccttt
ttgttcccctacctgttgatggcggtgtttggaggtgtccctctcttctatatggagctg
gctctcgggcagttccaccgcagcggctgcatctccatctggaaacacatctgccccatc
ttcaaagggatcggctttgccatctgcattatagccctctacattgccttctactacaac
accatcatggcctgggccttgtactacctactgtcatcatttgggtcaacccttccctgg
accacctgcaccaacagctggaacacagccaactgtaaccgctacatgtccaccgaccac
aatgtgtcgtggtccaactcctccacctcccccgcagaggagttctatactcgccaggtg
ttgcaggttcacctctccccaggcctgcaccagctgggctctgtcagctggcagctggcc
ctctgcctgctcttcatcttcaccatcgtctacttcagcatctggaaaggagtcaagacg
tctggaaaggtagtttgggtgactgctacctttccctatctggtccttcttatcttactc
atccatggggccactctgccaggggcctggaggggtgtcgtcttctatctcaagcctgat
tggacgaaactgcttagcacttcagtgtggattgatgcagcagctcagatcttcttctct
ctgggtccggggttcggtgtactccttgcctttgccagctacaacccatttcacaacaac
tgctacaaagacgcgttggtcaccagctctgtgaactgtctgaccagctttctgtctggc
ttcgttatctttactgtgctgggatacatggctgagatgaggcagcaggatgtggatgct
gtggccaaggatgctggacccagtctgctgttcatcatttatgcagaggccatagcaaac
atgcctgcctccactttctttgccattatctttttcctcatgatcataatgttgggtctg
gacagcacgtttgcagggttggagggggtgatcacagctatgttagatgagttccctcac
atcctgggtaagaggcgtgagtggtttgtctttggcctggtgtgtgtctgctacctcggg
gctctctccacactcacatatggaggagcgtttgtggtaaagctgtttgaggagtacgct
acaggccctgcagtcatcaccgtggtgctgctcgaagtcattgctgtttcctggttctat
ggtaccaaacgtttctgtaatgacatccaggtcatgcttggtttctacccgggttttttc
tggaggctctgctgggtggccatctgtccctgctttctgctgttcatcatcatcagtttc
ctggccttccctccagaggtcaggttgtttaactaccactacccacaatggaccactgtc
ctaggctactgcattggggtgtcctcattcatctgtgtgcctgcttacatggtctaccac
ctgctcaacgccaagggcacattcaaacagcgtcttttaaagagcatcactccagagccg
ggcagtgtggaccacagagactacattgtcaccaatgcagtctga
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