Lates calcarifer (barramundi perch): 108899190
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Entry
108899190 CDS
T04895
Symbol
cacna2d2a
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent calcium channel subunit alpha-2/delta-2a
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04260
Cardiac muscle contraction
lcf04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108899190 (cacna2d2a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
108899190 (cacna2d2a)
04261 Adrenergic signaling in cardiomyocytes
108899190 (cacna2d2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108899190 (cacna2d2a)
Ion channels [BR:
lcf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108899190 (cacna2d2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
vWA-TerF-like
Cache_3-Cache_2
DASH_Spc19
Exonuc_VII_L
dCache_2
Motif
Other DBs
NCBI-GeneID:
108899190
NCBI-ProteinID:
XP_050928189
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All DBs
Position
LG8:complement(9872597..10009549)
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AA seq
1107 aa
AA seq
DB search
MAICAQSYGIFCLFTIQTVLIICVSTPTDGTHLFPQHYTMIHWAGRIEKELEKVLQHVTG
TQQMRSIYNEKKSQFEIKRNNPKDLVERVARDISKLLNSKRKALEKLAREAEQLQKEHVW
QDGVTENAISYYDSKADSDYTEDGEEENPLDSSSSLELEFVDDLNFKNKVNYSSSAVQIP
TDIYKGSPVILNELNWTQALERVFIENRREDSSLRWQVFGSATGVTRYYPATPWRAPNKI
DLYDVRRRPWYIQGASSPKDMVIIVDVSGSVSGLTLKLMKTSVVEMLDTLSDDDYVNVAR
FNEKADAVVPCFRTLVQANVRNKKIFKEAVMHMQAKGTTDYKSGFTFAFEQLLNESSAPR
ANCNKMIMMFTDGGEDRAQEIFEKYNWPNKTVRVFTFSVGQHNYDVTPLQWIACANKGYY
FEIPSIGAIRINTQEYLDVLGRPMVLAGPKAKQVQWTNVYQDALGLGLVITGTMPVFNLT
ADTVSSQNQLILGVMGVDIAINEIKKKTPTYRLGANGYTFAIDPNGYVLLHPNLRPKIIN
FREPVTLDFLDAELEDSNKEEIRRQMIDGRSGQRKIKTLIKSVDERYIDEAMRTYTWTPV
DGTDYSLGLVLPTYSENHIKANLSDQILQVQYFESLLPNSFESEGHVFIAPREYCNDLEL
SNNNTEFLLNFIALMEKVTPDSKQCDNLLLHNLILDTGIIRQLVDKVWKNKDLNTYGFLA
VFAATDGGITRVFPNKAAETWEEDPEPFNASYYRRSLDNKGYIFRAPYRTARDELLNPEN
DTIGILVSTAVEITIGGKAIKPAVVGVKLDLEAWTDKFKILASNHTDNRQGSNTCGPNRG
CEMDCEANSDDLLCYLIDDGGFLIMSNQKDDWNKVGMFFSDVDPYLMYALYNNSFYNRKQ
SFDYQSVCERMPNSEAGAAPRGVFVPTIADFVNLAWWTSAAAWSLFQQFIYGLAYHSWFV
TDEVDAEGIDSKERSCVMIQTQYYLSNLSSSYNILQDCGNCSRLIHAKRINNTNLLFVVA
EKMPCNTCEIEKLSQEEEEFKEENPCEEMAVARYRKGPSTCFDNNVAENTSDCGRGHSFR
PSLYTLLLIQLLLLYPAVSPHILSLLH
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctgcgcgcagtcgtacggtattttctgcctcttcacaattcaaactgtactt
atcatatgcgtctccacgccgacagacgggacccacctcttcccccagcactacacaatg
attcactgggccggacgcatcgagaaggagctggaaaaggttctgcaacacgtcactgga
actcagcagatgagatcgatttataatgagaagaagagccagtttgaaatcaagagaaac
aaccccaaggacttggtggagagagtggcacgggacatctccaagctgctcaacagtaag
aggaaagccctggagaaactggccagggaggcggagcagcttcagaaggagcatgtatgg
caagatggtgtgacggagaatgccatttcatactacgattccaaagcggattcagactat
acggaggacggagaagaggagaacccgctggatagctcgtcctctttagagctggagttt
gtggatgatctcaattttaaaaacaaggtcaactactcatccagtgcagtccagattcct
acagacatatacaaaggctccccagtcatcctaaatgagttaaactggacccaggctctg
gagagggtcttcatcgagaaccgtagggaggacagctctctgcgttggcaggtgtttggc
agtgccacaggagtgacgcgatactacccagccactccatggagggcacccaacaagatc
gacctgtatgacgtccgcagaagaccatggtatatccaaggtgcatcgtctccaaaggac
atggtcatcatcgtggatgtgagcggaagtgtcagcggactcactctgaagctcatgaaa
acctccgtcgtggagatgctggacactttatcagatgacgactatgttaatgtggccagg
ttcaatgagaaggccgacgctgttgttccttgcttcaggactttggtccaagccaacgtt
cgtaacaagaagatcttcaaggaggctgtcatgcatatgcaagccaaaggaaccacagat
tacaagtctggcttcacattcgcctttgaacagcttctcaatgagagcagcgccccgagg
gccaactgcaataagatgataatgatgtttacagatggcggggaggatcgtgcacaggaa
atctttgagaagtacaactggcccaacaaaacagttcgtgtgttcaccttctctgttggg
cagcataattatgatgtcacccctttgcagtggatagcttgtgccaataaaggttactac
tttgaaattccatcgattggagccatcagaatcaacacccaggagtacctggatgtcctg
ggccgtcccatggtgttggccgggcccaaagccaagcaggttcagtggaccaacgtctac
caggacgcgctgggtttgggccttgtcatcaccgggaccatgccagtcttcaacctcact
gctgatactgtcagctctcagaaccagctcatcctgggcgttatgggagtagatatcgca
atcaacgaaatcaaaaagaagactcctacgtacagactcggagccaacggttacaccttc
gccatcgacccaaacggttatgtactgctgcatcccaacctgcgacctaagatcattaac
tttagggagcccgtcactcttgactttctggatgcagagctggaggacagcaacaaggag
gagatccgtcgacagatgattgatggcagatcggggcaaaggaaaatcaagacgctcatt
aagtcagttgatgagaggtacatcgatgaggccatgcggacatacacgtggacgcctgtg
gacggtacagactacagcctagggttggtactgcccacatatagtgagaaccacatcaag
gccaacctgagtgaccagatccttcaggtgcagtattttgaatcactgctgccaaacagt
tttgagtctgaaggacatgtattcattgctcccagggagtactgcaatgatctggaactg
tccaacaacaacactgagtttctgctcaactttattgctctcatggagaaggtgacaccg
gactctaaacaatgtgacaatttgctccttcataacctgattctggacactggcatcatc
agacagctggttgataaagtgtggaagaataaagacttgaacacatacggctttctagcc
gtgttcgctgcaacagacggtggtataacaagagtgtttcccaacaaggctgcagaaacc
tgggaggaagaccccgagccatttaatgccagctattaccgccgcagcctcgacaacaag
ggctacatcttccgagcgccttatcgaacagccagggacgagctgctgaacccagaaaac
gacaccatagggatcctggtcagcacggctgtggagatcacaataggaggaaaggccatc
aaacccgcagttgtcggagtgaaactagaccttgaagcctggacagataagttcaagatt
ctcgccagtaaccacacagacaaccgtcaaggctcaaatacgtgtggaccaaacaggggc
tgtgaaatggactgtgaagccaacagtgatgatctcctgtgttatttaatagatgacggt
ggattcctgatcatgtccaatcagaaggacgactggaacaaggtgggaatgttcttcagc
gacgttgacccttacttgatgtacgctctctacaacaactctttctacaaccgcaagcag
tcattcgattaccagtcggtgtgtgaacggatgcccaacagcgaagccggagctgcaccc
agaggagtgtttgtgcctacaattgcagattttgtaaacctggcttggtggacatcagca
gctgcgtggtccttgttccagcagtttatatatggactggcttatcacagttggttcgtc
acagatgaggtggatgcagagggaatcgattccaaagagcggagttgtgtaatgatccag
acccagtactacttgagtaacctcagcagctcctacaacatactgcaagactgtggcaac
tgctccaggctgattcatgccaagaggataaacaacaccaacttactgtttgtggtggca
gagaagatgccatgcaacacctgcgagatagagaagctgtcccaggaggaggaggagttc
aaggaagaaaatccgtgtgaagaaatggctgtggcacgttatcgaaaaggaccatccacc
tgctttgacaataacgtcgctgagaacacgtcggactgtgggcgaggtcactctttccgt
ccgtctctctacactctgctgctcattcagctgcttctgctttatccggccgtcagcccc
cacattctctccctactacattaa
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