Lates calcarifer (barramundi perch): 108899253
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Entry
108899253 CDS
T04895
Symbol
hyal1
Name
(RefSeq) hyaluronidase-1
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00531
Glycosaminoglycan degradation
lcf01100
Metabolic pathways
lcf04142
Lysosome
Module
lcf_M00076
Dermatan sulfate degradation
lcf_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
108899253 (hyal1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108899253 (hyal1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
lcf02042
]
108899253 (hyal1)
00536 Glycosaminoglycan binding proteins [BR:
lcf00536
]
108899253 (hyal1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lcf00537
]
108899253 (hyal1)
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
108899253 (hyal1)
Bacterial toxins [BR:
lcf02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
108899253 (hyal1)
Glycosaminoglycan binding proteins [BR:
lcf00536
]
Heparan sulfate / Heparin
Enzymes
108899253 (hyal1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lcf00537
]
Enzymes
108899253 (hyal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
DL-JAG_EGF-like
Rv0078B
EGF
Motif
Other DBs
NCBI-GeneID:
108899253
NCBI-ProteinID:
XP_018555129
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All DBs
Position
LG8:complement(10053232..10057332)
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AA seq
440 aa
AA seq
DB search
MSSFHSELLLLLNLISLVSGLQVETSPFSQVPFLAVWNAPTATCLSKYGVDFNLETFNIA
QNQNQTFMGENITIFYADKLGLYPRYSTLGVPVNGGVPQNASLDEHLREASDDIRKFIPN
RDFQGLAVVDWESWRPIWERNWDNKQVYWEASRALVRSRHPDWNPQQIEAEARVRFEEAG
RKFMEETLKLGREERPNGLWGFYGFPECYNYYNKSANFSGECPAEEMKRNDELLWLWNSS
SALYPDIYLSLELRGLSREVLFYTHHRIMEAMRAGAQVTPSAPPVFPYARIVYTYSFEFL
SEEHLVYTIGESAALGSAGVILWGNRDYSRSQAACNAVKSYVEEILGPYVVNVTSAAALC
SQMLCSSQGRCQRRDPNSGAYLHLDPAVWKVVSKREPDGRKSYKVLGQVMANEVTFMKSE
FQCQCFPGWGGETCSKPIQG
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctttcattctgagctgctgctgcttctaaatctaatcagccttgtttcaggg
ctgcaggtggaaacatcacctttctcccaggtgcctttcctcgctgtgtggaatgcccct
acagctacctgcctctccaagtatggcgtggacttcaacttggagaccttcaacatcgcc
cagaaccaaaaccaaacctttatgggagaaaacataaccatcttctatgctgataagctc
ggtctgtatcccaggtactccaccctgggagtgcctgttaatggcggagtcccacagaac
gcaagtctggatgagcacctcagagaagcctctgatgatatccgcaaattcatccccaac
agggatttccagggcctggctgtggtggactgggagagctggagacctatatgggagagg
aactgggataacaagcaggtgtactgggaggcgtcaagagcactggtgaggtccaggcat
ccggactggaacccccaacagatagaggccgaagcccgggtgaggtttgaggaagcaggg
aggaagttcatggaggaaacgctgaaactggggcgcgaggaaagaccgaatgggttgtgg
ggtttctatggttttcctgagtgctacaactactacaacaaaagcgcaaacttctccggg
gagtgtccggccgaggagatgaagaggaacgatgagctgctgtggctgtggaacagctcc
tctgctctgtaccctgacatctacctcagcctcgagctgcgaggcctcagcagagaggtg
ctcttctacacccaccaccgcatcatggaggccatgagagcaggggctcaggtgactcca
tcagcaccacctgtgttcccctacgctcgcatcgtctacacctactcatttgaattcctc
tctgaagagcacctggtctacaccatcggggagagtgctgctttaggatctgcaggggtg
atcctctggggcaaccgtgactactccagatctcaggctgcatgtaatgctgtcaaatcc
tacgtcgaagagatcctgggtccttacgtggtgaatgtaacatcagcggccgctctttgc
agccagatgttgtgttcctctcagggaagatgtcagaggagagacccgaactcgggggcc
tacttgcaccttgatcccgccgtgtggaaggtggtgtccaagagggagccggatgggagg
aagagctacaaagttttaggacaggtgatggcgaatgaggtaacgttcatgaagtctgag
tttcagtgccagtgtttcccagggtggggcggagagacctgctccaagccaattcaggga
tag
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