Lates calcarifer (barramundi perch): 108900026
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Entry
108900026 CDS
T04895
Name
(RefSeq) glutamate decarboxylase 2
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00250
Alanine, aspartate and glutamate metabolism
lcf00410
beta-Alanine metabolism
lcf00430
Taurine and hypotaurine metabolism
lcf00650
Butanoate metabolism
lcf01100
Metabolic pathways
Module
lcf_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
108900026
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
108900026
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
108900026
00430 Taurine and hypotaurine metabolism
108900026
Enzymes [BR:
lcf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
108900026
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Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
108900026
NCBI-ProteinID:
XP_018556337
UniProt:
A0A4W6DYJ4
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Position
LG24:15468526..15484939
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AA seq
586 aa
AA seq
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MASHGFWSLGGDNAGANTGSQSPSTPRAWCQAAAQKLSGGIGSKLCALLNVGEVEKPAEP
GAKQPPQQTATAGNCGCNKSCNCTKAAVAFSDLYSTDLLPAMDGDTKTMTFLQEVVDILM
AYIVESFDRETKVIDFHYPNELLQMNNWELQDEPATLDDILISCRATLKYAIKTAHPRYF
NQLSTGLDMVGLAADWLTSTANTNMFTYEVAPVFVLLEYVTLKKMREIIGWPDGRGDGIF
SPGGAISNMYAMLLARFKMFPEVKEKGMSSVPRLVAFTSEHSHFSIKKGAAALGIGTESV
ICIKADESGKLVPADLERRILEAKQKGFVPFFVSATAGTTVYGAFDPLIAISDICKKYNI
WMHVDGAWGGSLLMSRRHRWKLDGVERANSVTWNPHKMMSVPLQCSALLVREEGLMQNCN
QMHACYLFQQDKHYDLSYDTGDKALQCGRHVDIFKLWLMWRAKGTIGFEAQIDKCLELSE
YLYNKIKDREGYEMVFDGKPQHTNVCFWYLPPGIRYMEDKEERKKHLHKVAPVIKARMME
YGTTMVSYQPQGDKVNFFRMVISNPAATFEDIDFLIEEIERLGQDL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcatcacacggtttttggtctctcggcggagataatgcgggggccaataccgggagt
cagagccccagtacgcccagggcttggtgccaagcggcggcccagaaattatccggagga
attggatcgaaattatgtgcgctgctcaatgtcggggaagtggagaaacccgccgagccc
ggcgccaagcagccgccacagcagacggcaactgccggcaactgcggctgcaacaaatcc
tgcaactgcaccaaagctgccgtagccttctccgacctctattcaacagacctgttacct
gccatggacggtgacaccaagacaatgaccttcctgcaggaagttgtggatattttaatg
gcctacatcgtggagtctttcgaccgggaaacgaaagtgattgattttcactaccccaac
gagctgctgcagatgaacaactgggagctgcaggacgagcccgcgactctggatgatatc
ttgatcagttgtcgcgctactctgaaatacgccatcaagacagcccaccccaggtacttc
aatcagctctccacaggattagacatggttggactggcagccgattggctgacatccact
gctaacaccaatatgttcacctatgaggtggctcctgtcttcgtgctgctggaatacgtc
actctgaagaaaatgagggaaatcattggctggccagatgggcgaggagatggcattttc
tctcctggtggtgctatttctaatatgtatgccatgctgctggcccgtttcaagatgttc
cctgaagtgaaggagaaaggaatgtcatccgttcccagactggtggccttcacatccgaa
catagccatttttcaatcaaaaaaggtgcagcagctcttggcatcgggactgaaagtgtg
atctgcatcaaagcggatgaaagcggtaaactggtccccgctgaccttgagaggagaata
ctggaggcgaaacagaaggggtttgtacctttctttgtgagtgcgactgctggaacaaca
gtatacggagcctttgaccctctcatcgctatttctgacatctgcaaaaagtacaacatc
tggatgcatgtggatggtgcatggggaggaagtctccttatgtccaggaggcacagatgg
aagctggatggagttgagagagccaattcagttacatggaacccgcacaaaatgatgtca
gtccctctgcagtgttctgccctgctggtcagagaggagggtttgatgcagaactgcaac
cagatgcacgcctgctacttgttccagcaggacaaacactacgacctctcctacgacacc
ggagacaaagcgctacagtgcggacgccatgtggacatcttcaagctgtggctcatgtgg
agagccaagggcaccattgggttcgaggctcagattgacaagtgtctggagctgtcggag
tacctctacaacaagatcaaagacagagaaggatacgagatggtctttgatggaaaacct
cagcacaccaatgtctgcttctggtacctccctcctgggatccgctacatggaggacaaa
gaggagagaaagaaacacttgcacaaggtggccccagtgatcaaagccaggatgatggag
tacgggacgaccatggtcagctaccaaccacaaggggacaaggtcaactttttccgcatg
gtgatctcgaatcccgctgctacgttcgaggacatcgactttcttattgaggagattgaa
cgactgggccaagatctataa
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