Lates calcarifer (barramundi perch): 108900253
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Entry
108900253 CDS
T04895
Name
(RefSeq) acetylcholine receptor subunit delta
KO
K04816
nicotinic acetylcholine receptor delta
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108900253
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108900253
Ion channels [BR:
lcf04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
108900253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
108900253
NCBI-ProteinID:
XP_018556736
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All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MKLQPAALGAVFLLALLSSECWGRNEEERLINYLFKERGYNKELRPVESQRDAVDVYLAL
TLSNLISLKEVDETLLTNVWIDHTWTDYRLSWNSTEFDGIEMLRLPSSMVWLPEIVLENN
NDAQFQVAYYSNVLVDPTGLCYWLPPAIFRSSCSINVNYFPFDWQNCTLKFTSLTYNARE
IRMLLKEEADETSKWTVEWIIIDPASFTENGEWEIIHRPAKRNTYKHIPMESNKHQDITF
YLVIKRKPLFYIVNIIIPCVLISFLASLVYYLPADSGEKMTLSISVLLAQSVFLLLISQR
LPETSMSVPLIVKYLMFIMVLVTVVVLNCVVVLNLHFRTPSTHVMSEWTKKFFLERLPRI
LRMSRPAEAEPYWDGALPRRSSSVGYIATAEEYYSVKSRSELMFEKQSERHGLMTRTTHA
AVVKPQEDGGVTDQLYAEIKPAVDGANYIIKHMRHKNDYNEEKDNWSGIARTVDRLCLFL
VTPVMTFGTIIIFLMGICNHPPHLPFKGDPHDYREENPRLL
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttcagcctgcagcactgggcgctgtgttcctgctcgcactgctctcatccgag
tgctggggcaggaacgaggaggagcgtctcatcaactacctgttcaaagaacgagggtac
aacaaagagctgcgtcccgtcgagagtcagcgggacgccgtcgacgtgtacctcgccctc
acgctctccaacctcatctctctgaaagaagtcgatgagacgctgctgacaaacgtatgg
atagatcatacgtggactgactaccggctgtcgtggaattcgacggagtttgacggcatt
gagatgcttcgcctgccgtccagtatggtgtggctgccagagattgtgctggaaaacaat
aacgatgcccagttccaggtggcctactacagtaacgtcctggtggatcctaccggtctc
tgctactggttgcctcccgccatcttccgctcttcctgctccatcaacgtcaactacttc
cccttcgactggcagaactgcacgctcaaattcacctctctgacctacaacgccagagag
atcaggatgctgctgaaggaagaggcggacgaaaccagcaaatggacggtggagtggatc
atcattgaccctgcgagctttacagagaacggcgagtgggagatcatccaccgtccggcc
aagaggaacacctacaaacacattcccatggagagcaacaagcaccaggacatcaccttc
tacctggtcatcaaacgcaaacctctcttctacatcgtcaacatcatcatcccctgtgtg
ctcatttccttcctggcctcgctcgtctactacctccccgctgacagtggtgagaagatg
accttgtccatctctgtgctcttggctcagtctgtcttcctgctgctgatctctcaaagg
ctgcccgagacgtccatgtccgtaccgcttatcgtcaagtatttaatgttcatcatggtg
ctggtgacagtggtggtgctgaactgtgtggtcgtcctcaacctgcacttcaggacaccg
agcactcacgtcatgtccgagtggaccaagaagttcttcctcgagcggctgccccggatc
ctgcgtatgtcccgccccgcagaggcggagccgtactgggacggagcgctgccgcggcga
tccagctcggtggggtacatcgccacggcggaggagtactacagcgtcaagtcccgcagc
gagctgatgtttgagaaacagtcagagaggcacggactgatgacgcgaaccacacacgcc
gcagtggtgaagccacaggaagatggaggagtgacggatcagctgtacgctgagatcaag
ccggcggtggacggagcgaactacatcatcaaacacatgcgccataagaacgactacaac
gaggagaaagataactggagtggcatcgctcgcacggtggaccgtctctgtctcttcctg
gttaccccggtgatgaccttcggcaccatcatcatcttcctgatgggaatctgtaaccac
cctccacatctgcccttcaaaggagacccacacgactacagagaggaaaacccacgcctg
ctgtaa
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