Lates calcarifer (barramundi perch): 108900515
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Entry
108900515 CDS
T04895
Name
(RefSeq) paired box protein Pax-7 isoform X1
KO
K09381
paired box protein 3/7
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108900515
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108900515
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PAX
Pax7
Homeodomain
Homeobox_KN
HTH_23
HTH_32
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
108900515
NCBI-ProteinID:
XP_018557126
UniProt:
A0A4W6CX08
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Position
LG6:1266049..1322660
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AA seq
514 aa
AA seq
DB search
MSSLPGTVPRMMRPAPGQNYPRTGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKRIEE
YKRDNPGMFSWEIRDKLLKDGVCDRSTVPSGEASPVSSISRVLRARFGKKDDEDECDKKD
EDGEKKTKHSIDGILGDKGSRMDEVSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFE
RTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGM
PTLPTYQLPESSYPSNTLSQDGGGTVHRPQPLPPSTMHQSGLSSTDSSSAYGLASNRHGF
SSYSDTFMSSAAPSNHVNPVSNGLAPQVMSILSNPSGVSSQPQHDFSISPLHSALDSSPS
NTISASCSQRSAEASIKTVDSLPSSQSYCPPTYSTTSYSMDSAVAAAGYQYSQYGQTAVD
YLAKNVSLSSQRRMKLADHSAVLGLLQVETGQAY
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctttgccaggaacggtaccgcggatgatgcgcccggctcccggacagaactat
ccccgcactggattccctctggaagtgtccactcctctgggccagggacgggtcaaccag
cttggaggggtcttcattaacggccggcctctgcccaaccacatccgacacaagatagtg
gagatggcccaccacgggatccggccctgcgtcatctcccgacagctgcgggtctcccac
ggctgcgtctccaagatcctctgccgctaccaggagaccggctccattcgacccggagcg
atcggaggcagcaagcccaggcaggtagccacgccggacgtggagaagcggatagaggag
tacaagcgggacaaccccggcatgttcagctgggagatccgggataagctgctgaaggac
ggtgtgtgtgacagaagcacagtcccttcaggtgaggcctcccctgtcagttcgatcagc
cgtgtacttcgagctcgatttggaaaaaaggacgatgaggacgagtgtgataagaaggat
gaagacggagagaagaaaaccaaacacagcatcgacggcatcctcggcgacaaaggcagt
cggatggatgaagtgtcagacgtggagtcagagcctgacctcccgctaaagaggaagcag
cgcaggagtcggaccacattcacagcggagcagctggaggagctggagaaggctttcgaa
agaacccactaccccgacatctacaccagggaggagctcgcccagaggactaaactgact
gaggccagggtccaggtgtggttcagcaatcgaagggccaggtggcgaaagcaagcagga
gccaatcagcttgcagcattcaaccacctgttgccaggcggatttcctcccacagggatg
ccaacacttcctacataccagctgccagagtccagctacccaagcaatactctgtcccaa
gatggtggtggtacagttcaccgtccacagcccttacctccatccaccatgcaccagagc
ggactgtccagcactgacagcagctccgcctacggtctggcctccaaccgtcatggcttc
tccagctactctgacacttttatgagctctgcagcacctagcaaccatgtcaaccctgtc
agcaatggactcgccccacaggtgatgagcatcctgagtaacccaagtggcgtttcctcg
cagccacaacatgacttctccatttcaccgctccatagcgccttggactcctctccatcc
aacaccatttcagccagctgcagccagcgttcagctgaggcctccattaagacagtggac
agccttccatcatcccagtcctactgccccccaacatacagcacgaccagctacagcatg
gactcagctgtggcagctgccggctaccagtacagtcagtatggccagactgctgtggat
tacctggcaaagaacgtcagtctgtccagtcagcgcaggatgaagctggcagaccactcg
gctgtattgggactgctgcaggtcgagactggccaggcctactag
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