Lates calcarifer (barramundi perch): 108901072
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Entry
108901072 CDS
T04895
Name
(RefSeq) activin receptor type-1C isoform X1
KO
K13568
activin receptor type-1C [EC:
2.7.11.30
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04060
Cytokine-cytokine receptor interaction
lcf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108901072
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108901072
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcf01001
]
108901072
Enzymes [BR:
lcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.30 receptor protein serine/threonine kinase
108901072
Protein kinases [BR:
lcf01001
]
Receptor serine/threonine kinases (RSTK): TKL group
TGFBR1 family [OT]
108901072
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
TGF_beta_GS
Activin_recp
Pkinase_fungal
FTA2
SNF
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
108901072
NCBI-ProteinID:
XP_018557950
UniProt:
A0A4W6FNA4
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Position
LG1:19478762..19493941
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AA seq
493 aa
AA seq
DB search
MTCPRKQSFHAALIFLFVAQLTAGLKCVCHLCANHTCETSADGACWNSVMLIDGKEETVK
SCLSPSEMKGQVFCYSSRNVSKRNCCFTDFCNNETLHIHPERPLEEPGWSRLQLTVVIVV
PSCLLCVGILLGVFVVQGHHCAYSRAHKQDPEEPLDDQMLMSPDKSLKDLIYDMSTSGSG
SGLPLLVQRTIARTIVLQEIIGKGRYGEVWRGKWRGEDVAVKIFSTRDERSWFREAEIYQ
TIMLRHENILGFIAADNKDNGSWTQLWLVSEYHEHGSLYDYLNRYTVSTEGMIILALSIA
SGLAHLHMEIIGTQGKPAIAHRDLKSKNVLVKKNGTAVIADLGLAVKHDSNTNTIDIPSN
HRVGTKRYMAPEILDESINMNSFESFKRADIYSLGLVFWELARRCSVRGLHEDFQLPYYD
LVPSDPSVEDMRKVVCDQKLRPNIPNQWQSCEAMRVMGKLMRECWYTNSAARLTALRVKK
TVSHLSAIKDVKE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgacttgtcccaggaagcagagctttcacgcggcgttgatcttcctgtttgtcgcccag
ctgactgcaggtcttaagtgtgtgtgtcatctgtgtgccaaccacacctgtgagacgagc
gcagacggcgcctgctggaactctgtgatgctgatcgacgggaaggaggagacggtaaag
tcctgcctgtcgccctccgagatgaagggccaggtcttctgctacagctcccgtaacgtc
tccaagaggaactgctgcttcactgacttctgcaacaacgagactctgcacattcaccca
gagaggcctttggaagaaccaggctggagcaggctgcagctcactgtggtgatcgtggtg
ccgtcctgcctgctgtgtgtggggatccttctaggtgtgtttgttgtgcagggccaccac
tgtgcctacagccgagcccacaagcaagacccagaggagcctctggatgaccagatgctc
atgtcacctgacaaatctctcaaagatctgatctatgatatgagcacctcaggctctgga
tcaggtctgccactgctggtccagagaaccatagctcggaccattgtcctgcaggagatc
atagggaagggtcgatatggtgaggtgtggcggggcaaatggcgaggagaggatgtggcg
gtgaagatcttctccaccagggatgagaggtcctggttccgtgaagcagagatttatcag
accatcatgctcagacatgaaaacattctgggcttcattgctgctgacaacaaagataat
ggctcgtggactcagctctggttggtgtcagagtatcatgagcacggctccctgtatgac
tatctgaacaggtacacagtttcgacggagggcatgatcatcctggctttgtcaatagcc
agtggactggcacatctccacatggaaatcattggcacgcaggggaagcctgccattgct
cacagagacctaaagtctaaaaatgtcctggtgaaaaagaacggcacagcagtcattgca
gatttgggtttggccgtgaaacatgactccaacaccaacaccatagacataccgtccaac
caccgagtgggaaccaagaggtacatggccccagaaatcctggatgagtcaatcaatatg
aacagctttgagtcattcaagcgggcggatatctactcgctaggcctggtgttctgggaa
ctggcccgaagatgctctgtgaggggacttcatgaagatttccagctgccttattacgac
ctggtgccttcagatccctcagtcgaggacatgaggaaggtggtgtgtgatcagaaactc
agacccaacattcccaaccagtggcagagctgtgaggccatgcgagtgatgggcaaactg
atgagagagtgctggtacactaactccgccgcccgactcactgcgctacgagtcaagaaa
accgtgtcccacctgtccgccatcaaagacgtcaaagaatag
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