Leptothrix cholodnii: Lcho_2418
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Entry
Lcho_2418 CDS
T00681
Name
(GenBank) fumarate lyase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
lch
Leptothrix cholodnii
Pathway
lch00362
Benzoate degradation
lch01100
Metabolic pathways
lch01120
Microbial metabolism in diverse environments
lch01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Lcho_2418
Enzymes [BR:
lch01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
Lcho_2418
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GFIT
Motif
Pfam:
Lyase_1
ADSL_C
Motif
Other DBs
NCBI-ProteinID:
ACB34683
UniProt:
B1Y5H1
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Position
2624832..2626178
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AA seq
448 aa
AA seq
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MASTIIDSAIFQGIFSSDAMRQVWSDENRTQKYLDIERALAVVQGRLGLIPQEAADEIVS
HCHLDQIDLVKLRAQTERIGYPILGVVSQLNALCRDQLGEYCHWGATTQDITDTATVLQI
REALTLVDDELAAIATAMARLAREHRLTPVIGRSNLQQAIPVTFGYKIAGLLSAVLRHRE
RIAQLRERVLVGEFAGAAGTLASLESGAMETQAGLCAELGLAQPVIAWHTIRDNIAEVGA
VLGLIGGTLGKLSMDVKLMMQTEVGEVQEPYYHGRGSSSTMPQKRNPISSAYVHGAISVL
RQHAAALMDAMVADHERSTGPWQIEWIVLPEAFCLLAGALKQSRVIVEGLEVDADAMMRN
IEMTGGLVMSEAVMMGLGPFIGREYAHDLVYDLCRESLAKKAPLLDLLAAHPEINRHVDR
AALARMLDPANYLGQSGVMVDRVLTRMG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcctccacgatcatcgactccgccatcttccagggcatcttcagcagcgacgcgatg
cgccaggtgtggtcggacgaaaaccgcacgcagaagtacctcgacatcgaacgcgccctc
gccgtcgtgcagggccggctcggcctgatcccgcaggaggcggccgacgagatcgtgagc
cactgccacctcgaccagatcgacctggtgaagctgcgcgcgcagaccgagcgcatcggc
tacccgatcctgggcgtggtgtcgcagctcaacgcgctgtgccgcgaccagctcggcgag
tactgccactggggtgcgaccacgcaggacatcaccgacaccgccaccgtgctgcagatc
cgcgaggcgctgacgctggtcgacgacgaactggcggcgatcgcgacggcgatggccagg
ctggcgcgcgaacaccgcctgacgccggtgatcggccgcagcaacctgcagcaggcgatc
cccgtgaccttcggctacaagatcgccggcctgctgtcggccgtgctgcggcaccgcgag
cgcatcgcgcaactgcgtgaacgcgtgctggtgggcgagttcgccggggcggccggcacg
ctggcttcgctcgaatcaggcgccatggaaacgcaggccggcctgtgcgccgaactcggc
ctggcgcagccggtgatcgcctggcacaccatccgcgacaacatcgccgaggtcggcgcc
gtgctcggcctgatcggcggcacgctgggcaagctcagcatggacgtcaagctgatgatg
cagaccgaggtcggcgaagtgcaggagccctactaccacggccgtggcagcagcagcacg
atgccgcagaagcgcaacccgatcagcagcgcctacgtgcacggcgccatcagcgtgctg
cgccagcacgccgcggcgctgatggacgcgatggtggccgaccacgaacgcagcaccggc
ccgtggcagatcgagtggatcgtgctgcccgaggccttctgcctgctggccggcgcgctc
aagcagagccgcgtcatcgtcgagggcctggaggtcgatgccgacgccatgatgcgcaac
atcgagatgaccggcggcctggtgatgagcgaggcggtgatgatgggcctgggcccgttc
atcggccgcgagtacgcccacgacctggtctacgacctgtgccgcgaatcgctggcgaag
aaggcgccgctgctcgacctgctggctgcgcatcccgagatcaaccggcacgtcgaccgt
gcggcgctggcgcgcatgctggacccggccaactacctcggccagtccggcgtgatggtc
gatcgggtgctgacgcgcatgggctga
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