Latimeria chalumnae (coelacanth): 102355041
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Entry
102355041 CDS
T02913
Symbol
CDKAL1
Name
(RefSeq) CDK5 regulatory subunit associated protein 1 like 1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcm03016
]
102355041 (CDKAL1)
Enzymes [BR:
lcm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
102355041 (CDKAL1)
Transfer RNA biogenesis [BR:
lcm03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
102355041 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
102355041
NCBI-ProteinID:
XP_005997354
Ensembl:
ENSLACG00000006141
UniProt:
H3AB97
LinkDB
All DBs
Position
Un
AA seq
575 aa
AA seq
DB search
MPASCDSPVEDIEDIVAAQDPKPHDRHFVRKSVVPRARKRNQQKQEEDAEEPPSDSVIPG
TQKVWVRTWGCSHNNSDGEYMAGQLAAYGYKIIENPSDADLWLLNSCTVKNPAEDHFRNS
IMKAREQDKKVVVAGCVPQAQPRMDYLKGLSVIGVQQIDRVVEVVEETIKGHSVRLLGQK
KDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPVEELVDRA
KQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEHL
EEMAKILVHPRVYAFLHVPVQSASDSVLMDMKREYCIADFKRVADFLKEKVPGITIATDI
ICGFPEETDEDFQETMKLVQEYRFPSLFINQFYPRPGTPAARMKQVPGHVKKQRTKELSQ
LFHSYNPYDHKVGERQHVLVTEESFDSQYYVAHNKFYEQVLVPKNPNFMGKMIEVDIYEA
GKHYLKGKPGADTKVYAPSITKPLAKGEVSGLTEEFRSLHVNGSNSHMHLSAANQKASGV
LLWLPWKLEGERLKMMVTVSLALLALVVAFAAEMF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcttcttgtgactcccctgttgaagacatcgaggatattgtggcagctcaggat
cccaagcctcatgatcgccactttgtgagaaaaagcgtagtccctagagctaggaaaaga
aaccaacaaaagcaagaggaggatgctgaagaacccccaagtgacagtgtcatccctggt
acacagaaagtctgggtcaggacatggggctgttctcacaacaactcggatggagaatac
atggcagggcagttggctgcttacggctacaaaattatagagaatccatcagatgcagac
ttgtggttgctgaacagttgcactgtgaaaaatccagctgaagaccacttcagaaactca
attatgaaggcccgggagcaggataaaaaagttgttgtggctggatgtgtcccccaagct
cagcctcgaatggattacctcaaggggctcagtgtcattggagttcagcagattgaccgt
gtagtagaagttgtggaggaaaccatcaagggtcactccgtgagactactgggtcagaaa
aaggataatggaaaacggttggggggagctcgattggatttgccaaagattaggaagaac
ccactgatagaaatcatttccatcaatacagggtgtcttaatgcttgcacctactgcaaa
actaagcatgccagaggcgacttggcaagttatcctgttgaagagttggttgacagagca
aaacagtcttttcaggagggtgtgtgcgaaatatggctaaccagcgaagatacgggggct
tacggaagagacatcggcacagacctgccaactcttctctggaaactggtggaagtgatt
cctgagggagctatgttgagactgggcatgaccaaccctccctatatattagagcatctg
gaggaaatggccaaaatccttgttcacccccgggtatatgccttcctccacgtccctgtc
cagtctgcctccgacagtgtcctcatggacatgaaaagagaatactgcatagctgacttc
aaacgagtcgccgactttttgaaagaaaaagtaccaggaattacaattgccacggacata
atctgtggttttccagaagagacagatgaggattttcaggaaacaatgaagctcgttcag
gagtacagatttccaagccttttcatcaatcagttttatcctcgaccaggaacccctgca
gccagaatgaaacaagtcccaggccacgtgaaaaagcagagaacaaaagaactgtcccag
ctgtttcattcatacaacccctatgatcacaaggttggtgagaggcagcatgttttggta
acagaagaatcctttgattcccagtattatgttgctcacaataaattttacgagcaggtt
cttgtacccaagaatcccaactttatgggcaaaatgatagaggtggacatttatgaagca
ggaaaacattacttgaaaggaaagccaggagcagacactaaagtctatgctccatcgatc
accaaacccttagcaaaaggagaggtgtctggtctaacagaggagttcagatccctacat
gtgaatggcagtaattcacacatgcacctgtctgcggcaaaccagaaggcatccggagtg
ttactgtggctgccatggaaactggaaggtgaaaggctgaagatgatggtgactgtcagt
ctggctttgctagccctggttgttgcctttgctgcagagatgttctga
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