Latimeria chalumnae (coelacanth): 102357279
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Entry
102357279 CDS
T02913
Symbol
GLB1
Name
(RefSeq) galactosidase beta 1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm00052
Galactose metabolism
lcm00511
Other glycan degradation
lcm00531
Glycosaminoglycan degradation
lcm00600
Sphingolipid metabolism
lcm00604
Glycosphingolipid biosynthesis - ganglio series
lcm01100
Metabolic pathways
lcm04142
Lysosome
Module
lcm_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
102357279 (GLB1)
09103 Lipid metabolism
00600 Sphingolipid metabolism
102357279 (GLB1)
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
102357279 (GLB1)
00604 Glycosphingolipid biosynthesis - ganglio series
102357279 (GLB1)
00511 Other glycan degradation
102357279 (GLB1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
102357279 (GLB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcm04147
]
102357279 (GLB1)
Enzymes [BR:
lcm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
102357279 (GLB1)
Exosome [BR:
lcm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102357279 (GLB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
102357279
NCBI-ProteinID:
XP_014348528
LinkDB
All DBs
Position
Un
AA seq
583 aa
AA seq
DB search
MALTGCTLLLLLLMARTALAVSRTFEIDYDHDCFVKDGKPFRYISGSIHYSRVPRYYWKD
RLLKMYMAGLDTIQMYVPWNFHESQPKIYDFSGDRDLEHFLQLANDTGLLVVLRAGPYIC
GEWDMGGLPAWLLRKKSIVLRSSDQDYLAAVDQWMGELLPRIKPFLYQNGGPIITVQFLL
IGGNVTAAFLTQRYAEPKGPLVNSEFYTGWLDHWGQAHSVVGKAIVAKSLNEILALGASV
NMYMFEGGTNFGYWNGANTPYAPQPTSYDYDAPLSEAGDLTDKYFAIREIIKKHKKVPLG
PVPPTTPKFAYGKVEMNKLGTLSEMLNKFSFTGPVKSVYPVNFVQLNQYFGFMLYRTKLP
KDCSKPTPLSSPLNGVHDRAYVTVDGVPQGILERDKSLSINITGTTGAQLDLLLENMGRV
TFGRYINDFKVRIQKGPIRHQTCKYTVIGKIQHLSSKGGNFSSVHHLEDVLHPNPEGCGF
ASHGTVTECAPKAESQGQVWINGFNLGRYWPARGPQITLFVPEHILSTSVPNNITVLELQ
RSPCDFGPCAVEFVDKPILNATVAYEISSKMFFSKDCWSGDFS
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggctctgaccggctgcaccctgctgcttctcttgctgatggcaagaactgcacttgca
gtcagtcggacatttgaaatcgattatgaccatgactgctttgtgaaggatggaaagcca
tttcgttatatatccggtagcatccattactccagggtgcctcggtactattggaaagac
cgcttgctgaagatgtacatggcaggactcgataccattcaaatgtacgtgccatggaac
tttcatgagtctcagccaaaaatatatgacttcagcggcgacagagatttggagcatttc
ttacagcttgcaaatgacacggggttgctggtcgttttacgagctgggccttacatctgt
ggcgaatgggacatgggaggtctgcctgcctggctgttaaggaaaaaatcaattgttttg
aggtcttctgatcaggattatcttgcagctgtggaccagtggatgggtgagcttttacca
agaattaaaccttttctgtatcagaatggaggaccaattattactgtgcagttcctgtta
ataggtggcaatgttactgcagcctttttaacacaaagatatgctgagcccaaaggacca
ctggtaaactccgaattttacactgggtggttagatcactggggccaggctcactctgtt
gtgggaaaagcaattgtagccaagtcgctgaatgaaattcttgcacttggtgccagtgtt
aacatgtacatgtttgaagggggtacaaattttggatactggaacggagcaaacacccca
tacgcaccccaaccaacaagctatgactatgatgctccattgagtgaagctggagacctt
actgacaaatactttgccatcagagaaattatcaaaaaacataagaaggtgcctttgggt
cctgttcctcctacaacacctaagtttgcctatggaaaagttgaaatgaacaagctgggt
acactgtctgagatgcttaacaagttctccttcactggaccggtaaaaagcgtatatcct
gtgaactttgttcagcttaaccagtactttggatttatgctgtacagaaccaagctgcca
aaagactgcagtaagcccacacccctttcatcaccactgaatggagtccatgatcgtgct
tatgtgactgttgatggggtcccacaaggaattcttgagagagacaaatctttaagcata
aatataactgggacaactggagcacagctagacctactattggagaatatgggcagagta
accttcgggagatacattaatgactttaaggtgagaatacaaaaagggcccatccgacat
caaacttgtaaatatactgttattgggaaaatacaacatttaagtagcaaaggtggaaac
tttagctcagtgcaccatcttgaggatgtcctccaccctaaccctgagggttgtggcttt
gctagccatggcactgtgactgagtgtgctccgaaggcagagtcacagggacaagtgtgg
attaatggatttaatttggggcgctattggccggccaggggtcctcaaatcaccttgttt
gtacctgagcacatactctccacatctgtgccaaacaacatcacagtgctggaattgcag
agatcgccatgtgactttggaccatgtgcggtagaatttgtggacaagccaattctaaat
gccacagttgcttatgaaatctcaagcaaaatgttcttctccaaagactgttggtcagga
gatttttcataa
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