Latimeria chalumnae (coelacanth): 102357703
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Entry
102357703 CDS
T02913
Name
(RefSeq) laminin subunit beta-1-like
KO
K06243
laminin, beta 2
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04510
Focal adhesion
lcm04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102357703
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102357703
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
ATG17_like
Tropomyosin
Laminin_II
Macoilin
ATG14
DUF1664
DUF948
Jnk-SapK_ap_N
ATG16
EzrA
BLOC1_2
CCDC93_CC
NPV_P10
IFT57
Motif
Other DBs
NCBI-GeneID:
102357703
NCBI-ProteinID:
XP_014345028
Ensembl:
ENSLACG00000014341
LinkDB
All DBs
Position
Un
AA seq
1741 aa
AA seq
DB search
MYTLDWRPGHLSEDSKANKLSLTPALYFRSPHCVHRGTNVMKPKLLATIFVMVSAQSALA
QDQPSLPQGCTEGSCYPATGNLLIGRAHGLSVTSTCGLQGAEEYCIVSHLQDSDKCFYCH
SYDPQQSHQIQNVIYLTNADGEKTWWQAENGVEKVSIRLNLEAEFHFTHLIMKFKTFRPA
AMLIERSVDFGLTWKAYRYFSYNCTKMFPGIRQTLRKVDDVICENRYSDIEPSTEGEVIY
KVLDPAVTVEDPYSLEIQDLLRITNLRINFTKLHTLGDNLLDQRKEVLAKYYYAVYELVV
RGSCFCYGHASECAPVEGVRVGVEGMIHGRCVCKHNTKGLNCENCRDFYHDLPWRPAEAN
NPHTCRQCDCNNHSRKCHFDMAVYLATGNVSGGVCDNCLHNTMGRNCEICKPFYYRNPMV
DIRTEGACIPCDCDPVGSLDGGICDSHTDFNLRMLAGQCRCKENVKGTRCDSCKEGFYGL
SENDPQGCQPCRCDPRGIVLSGPPCDQISGDCYCKRYVTGRYCGQCLPEYWGLSSDITGC
RPCDCDFGGAYNNRCLMENGHCDCRPHLIGRQCDDVQLGYFCMPLDYYTYEAEDATPHSP
TDQELPGEPRPEAQNDCLEYYNGVRNGRSVRLRRPQGIARALQQRAALRRTRQLQRKPDV
ETIRRPQAPNKMITWTGPGFARVKDGAGLVFKIDNIPYSMEYDIMIRYEPESAENWQAIV
SITSESLPMSHRCGNILPSEQMYSVSLQHQQRYLVLPRPFCFETNNRYIIAIRFQRDDAK
HRHVTAFILIDSLVLLPKYTELPGFHGNDPSSVHHREEMERYMCLDSFKMATMPTLAEMC
IKLICSVSAIIHDGALPCECDPQGSTSAVCEKIGGQCKCKPNVIGRHCDQCAPGTYGFGP
SGCYPCNCHSHGSVSDICDPSSGQCRCQHGAIGRQCDQCLPGQWGFPNCRPCQCNSHSEV
CNSKTGTCMDCRDYTTGRHCERCLDGYFGNPVLGSGEQCRPCPCPRYPGSGHYHGNSCDM
DQESNEIVCHCVPGYTGLRCDRCSPGYFGNPALEGSVCRPCQCNNNIETSDPGACDPQTG
TCLRCLFNTDGPSCAECKLGYYGNALLHSCRQCTCNLQGTLDSHCTQDGCYCDRVTGNCP
CRPNVIGRNCDQCAPNHWDFSQGPGCQPCACNVVHAVAPSCNMVRTHTSTSCDCDINGVE
TLQCNHSTGQCYCREGVTGPICNQCARGFHGNFPQCAHCHPCFHQWDQVVMSLQAELEGI
KRKVSDIIEGGLPDSFDEGRMKALEDKLAQIQELISSNGTSLQEQFNHVFQLENAIRREL
SQLSRKLEKIQRQLSNTELSNQEEREKLRALEDELRTLNESVHRFREQLKNAITSGFTET
VCGAPGHASCAESPCGGANCRDNLGNRVCGGKGCDGAVPTAVEALKKVQNVSKELTNKGA
ELDAVSQKIQQIQEEAQDTKEEVEKALSKAQEVKDRIASSTEELRNFIKKIKDFLNEEGA
DPESIELVARQVLNISLPASASDIAGVLKQIKDSISNVSNVDQILNATAENLQALKDLLK
RANEANPRKATANFVPLPDSCRRSVNDKVSAIGEKQMDAMNRLANLSKEVDELKNKMELN
RKMAAEAKEKADKAAVVAKDLNEVMEEVEKKYTKLKKQIEGLDDDSGDAASRVHKVKKEA
EDLLKKARSDLEKLKDLENKFQQNRKNMEEKIATLQELEQKANDLVQYIRNKSSAYASCT
S
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atgtacacattggattggcggcctggtcatctttcagaggacagcaaagcaaataaatta
agtctaacccctgctctgtattttaggtctcctcactgtgtgcatcgtgggaccaacgtt
atgaagccgaagctactggccaccatctttgttatggtctcagcgcagagtgccttggca
caggaccagccttcgttgccacagggctgcacagaaggaagctgctacccggcaacagga
aaccttctgattggccgagctcatggcctgagcgttacctccacgtgtgggctgcagggt
gctgaagagtattgcattgtcagccacctccaagattcagacaagtgcttttattgtcac
tcctacgacccacagcagagccaccagatccagaacgtgatctacctcacgaatgccgac
ggagagaagacctggtggcaggcagagaacggggtggagaaagtcagcatccgtctgaac
ctggaagcagagttccattttactcacctcatcatgaaattcaagacattccgccctgca
gctatgctgatcgagagatccgttgatttcggactcacctggaaagcgtaccgctacttc
tcctacaactgcaccaagatgtttcccggcatccggcagaccctcaggaaggttgatgat
gtcatctgcgagaatcgctactccgacatcgagccgtcaacagaaggagaagtgatttat
aaagttctggaccctgccgtcaccgtggaagacccttacagcctggagatacaagatctg
ctacgcatcacgaacctgcggatcaacttcaccaagctgcacaccctgggggacaacctc
ctggaccagcgtaaggaggtcctggcaaagtactactatgccgtctatgagctggtggtc
cgcgggagctgtttctgctatggccacgcttctgaatgtgcgccagtcgagggcgtgcgg
gttggagtcgaaggaatgatccacgggaggtgtgtttgcaaacacaacaccaaaggatta
aactgcgagaactgtagggacttctaccatgacctgccctggagaccagctgaggccaac
aacccccacacgtgcagacagtgcgattgtaacaaccactcgaggaagtgccactttgac
atggcggtgtacctggccacggggaacgtgagcggcggagtttgcgacaactgtttacac
aacaccatgggccgcaactgtgagatctgcaagcctttctactaccggaaccccatggtg
gacatccggacagagggggcctgcatcccctgtgactgtgacccggtgggctccctggac
gggggcatctgcgacagtcacacagacttcaacctgaggatgctcgccggccagtgccgc
tgtaaggagaacgtgaaagggactcgctgtgacagctgcaaggagggtttctatgggctg
agcgagaatgatccccaggggtgccagccttgcaggtgtgacccccgggggatcgttctc
agcgggccaccgtgtgatcagatcagcggagactgctactgtaagagatacgtcacaggg
cgctactgcggccagtgcctgcccgagtactggggcctcagcagtgacatcacgggctgt
cgaccatgcgactgtgactttggaggggcctataacaacagatgcttgatggagaatggg
cactgtgactgccgccctcacctcattggccgacagtgtgacgacgtgcagcttgggtat
ttctgcatgccactggattattacacatacgaggcagaggacgcaacgccccattcccct
acggatcaagaactaccgggagagcccagaccagaagcacagaacgactgcttggaatac
tacaacggagttcggaacgggcgaagcgtgaggctgcgccgaccgcagggcattgcccgg
gctctgcagcagcgggcagcgctgcgtcggacccggcagcttcagcgcaagccggatgtg
gagaccatccgtaggccgcaggctcctaataagatgatcacatggaccggccctggattt
gctagagtgaaggacggggcgggactggtgtttaagattgacaacatcccttactccatg
gagtacgacatcatgatccgatacgaacctgagtcagcagagaactggcaagccatagtg
agcatcacctccgagtctttgcccatgagccaccgctgtggaaatatcctgccttcggag
caaatgtacagcgtctcgcttcagcaccagcagaggtatctggtgctgcccaggcccttc
tgttttgagaccaacaatcgctacataatcgctatccgattccagcgggatgacgccaaa
cacaggcatgtgaccgcattcatcctaatcgactcgctggtcctcttgcccaagtacacg
gagctgcctggttttcacggtaatgacccgagctctgtacatcaccgagaagagatggaa
cgctacatgtgcttggactccttcaagatggccaccatgcctacgctggcggagatgtgc
atcaaactcatctgcagcgtctctgctataatacacgatggggcgctgccatgtgaatgt
gatcctcagggctccaccagtgcagtctgcgaaaagatcggagggcagtgtaaatgcaag
cccaacgtcattggccggcactgtgaccagtgcgctccagggacgtacggctttggcccg
tccggatgctatccttgtaactgtcactcccatgggtcagtcagtgatatctgtgacccc
tcctctggtcagtgtcgatgccagcatggtgccattgggcgccagtgtgaccagtgcttg
cccgggcagtggggcttcccgaactgtcggccttgccagtgtaacagtcactcagaggtt
tgcaactcaaagacagggacctgtatggactgccgtgactataccactggacgccactgt
gagaggtgtctggatggatactttggcaacccggtcctgggctctggagagcagtgccgt
ccgtgtccgtgccctaggtaccctgggagtggacattaccatggcaactcgtgcgacatg
gaccaggaatccaatgaaattgtttgccactgtgttcctggatacacaggtcttcggtgc
gatcgctgctctcctgggtattttgggaatcccgcgctggaaggcagtgtctgccgtccc
tgccaatgcaacaacaacattgagaccagcgacccgggggcatgcgacccccagaccggc
acgtgcctcaggtgtctcttcaacactgacgggccgagctgcgccgagtgcaaactgggt
tactatggaaacgccctactccacagctgtcggcagtgcacttgtaacctacaggggacg
ctggactcccattgcacccaggacggctgctactgtgacagggtgacaggaaactgcccc
tgccggccgaacgtgattggcaggaactgcgaccagtgtgcgcccaatcactgggatttc
agccagggacccggctgccagccctgtgcatgcaacgtcgtgcatgctgtcgctccgagc
tgcaacatggtgagaacacataccagcacatcctgcgactgtgacatcaacggtgtggaa
acactgcagtgtaaccacagcacgggccagtgctactgtcgggaaggcgtcacggggccc
atctgcaatcagtgcgcccgcggcttccacgggaacttcccccagtgcgcccactgccac
ccctgcttccaccagtgggaccaggtggtcatgagcctacaggcggagctggaggggatc
aagaggaaggtgtcggatatcatcgagggaggactccccgacagcttcgacgagggcagg
atgaaagccctggaggacaaactcgcacagattcaggaactaatcagcagcaacggaacc
agcttacaggagcagttcaaccacgtctttcagctggagaacgcaatcaggcgtgagctc
agtcagctctctaggaagctggagaagatacagaggcagctgagcaacacagagctgagt
aaccaggaggagagggagaaactgcgtgcactggaggacgaactgaggacgctgaatgaa
tccgtccaccgctttagggagcagctgaagaatgccatcacctcaggcttcacagaaacg
gtctgcggagcccctggtcatgcaagctgtgctgaatcgccttgtggaggcgctaactgc
cgggataatttgggaaaccgcgtgtgcggtgggaagggctgtgatggtgccgtgcccact
gctgtggaggcactcaagaaagtacagaacgtgagcaaagagctgaccaacaagggtgcg
gagttggacgccgtctcccagaagatccagcagatccaggaggaagcgcaggacacgaag
gaggaagtggaaaaggccttgagcaaggcgcaggaagtcaaggatcgcatcgccagctca
actgaagaactgcgaaacttcatcaaaaaaatcaaagactttttgaacgaggaaggcgcc
gacccagagagcattgagctggttgccagacaggtgctgaacatctctctcccagccagc
gccagcgacatcgccggagtcctgaagcagatcaaggacagcatctccaacgtcagcaac
gtggatcagatcctcaatgccaccgccgagaacctccaagccctgaaagatctgctgaag
cgagctaacgaagcaaaccctaggaaagctacagccaatttcgtgccccttccagacagc
tgtcggagatcagtcaatgacaaggtgagcgccattggagagaagcaaatggacgctatg
aaccgcttggccaacctctcgaaggaggtggacgagttgaagaataagatggagctgaac
aggaagatggcggcagaggcaaaggagaaggcggataaagcagctgttgtggccaaggat
ctgaatgaggtgatggaggaagtggagaagaagtacactaagctgaagaaacagattgag
ggtctggacgacgactcgggggatgccgccagcagagttcacaaggtcaagaaggaagcg
gaggacttgctgaagaaagccagaagcgaccttgagaaactcaaagatctggagaataaa
ttccagcagaacagaaagaacatggaagagaagatcgccacactgcaggaactggagcag
aaagccaacgacttggtccagtacatccgcaataaatccagcgcctatgcctcctgtacc
tcctaa
DBGET
integrated database retrieval system