KEGG   Latimeria chalumnae (coelacanth): 102357703
Entry
102357703         CDS       T02913                                 
Name
(RefSeq) laminin subunit beta-1-like
  KO
K06243  laminin, beta 2
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm04510  Focal adhesion
lcm04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102357703
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102357703
SSDB
Motif
Pfam: Laminin_EGF Laminin_N LAMININ_IV_B ATG17_like Tropomyosin Laminin_II Macoilin ATG14 DUF1664 DUF948 Jnk-SapK_ap_N ATG16 EzrA BLOC1_2 CCDC93_CC NPV_P10 IFT57
Other DBs
NCBI-GeneID: 102357703
NCBI-ProteinID: XP_014345028
Ensembl: ENSLACG00000014341
LinkDB
Position
Un
AA seq 1741 aa
MYTLDWRPGHLSEDSKANKLSLTPALYFRSPHCVHRGTNVMKPKLLATIFVMVSAQSALA
QDQPSLPQGCTEGSCYPATGNLLIGRAHGLSVTSTCGLQGAEEYCIVSHLQDSDKCFYCH
SYDPQQSHQIQNVIYLTNADGEKTWWQAENGVEKVSIRLNLEAEFHFTHLIMKFKTFRPA
AMLIERSVDFGLTWKAYRYFSYNCTKMFPGIRQTLRKVDDVICENRYSDIEPSTEGEVIY
KVLDPAVTVEDPYSLEIQDLLRITNLRINFTKLHTLGDNLLDQRKEVLAKYYYAVYELVV
RGSCFCYGHASECAPVEGVRVGVEGMIHGRCVCKHNTKGLNCENCRDFYHDLPWRPAEAN
NPHTCRQCDCNNHSRKCHFDMAVYLATGNVSGGVCDNCLHNTMGRNCEICKPFYYRNPMV
DIRTEGACIPCDCDPVGSLDGGICDSHTDFNLRMLAGQCRCKENVKGTRCDSCKEGFYGL
SENDPQGCQPCRCDPRGIVLSGPPCDQISGDCYCKRYVTGRYCGQCLPEYWGLSSDITGC
RPCDCDFGGAYNNRCLMENGHCDCRPHLIGRQCDDVQLGYFCMPLDYYTYEAEDATPHSP
TDQELPGEPRPEAQNDCLEYYNGVRNGRSVRLRRPQGIARALQQRAALRRTRQLQRKPDV
ETIRRPQAPNKMITWTGPGFARVKDGAGLVFKIDNIPYSMEYDIMIRYEPESAENWQAIV
SITSESLPMSHRCGNILPSEQMYSVSLQHQQRYLVLPRPFCFETNNRYIIAIRFQRDDAK
HRHVTAFILIDSLVLLPKYTELPGFHGNDPSSVHHREEMERYMCLDSFKMATMPTLAEMC
IKLICSVSAIIHDGALPCECDPQGSTSAVCEKIGGQCKCKPNVIGRHCDQCAPGTYGFGP
SGCYPCNCHSHGSVSDICDPSSGQCRCQHGAIGRQCDQCLPGQWGFPNCRPCQCNSHSEV
CNSKTGTCMDCRDYTTGRHCERCLDGYFGNPVLGSGEQCRPCPCPRYPGSGHYHGNSCDM
DQESNEIVCHCVPGYTGLRCDRCSPGYFGNPALEGSVCRPCQCNNNIETSDPGACDPQTG
TCLRCLFNTDGPSCAECKLGYYGNALLHSCRQCTCNLQGTLDSHCTQDGCYCDRVTGNCP
CRPNVIGRNCDQCAPNHWDFSQGPGCQPCACNVVHAVAPSCNMVRTHTSTSCDCDINGVE
TLQCNHSTGQCYCREGVTGPICNQCARGFHGNFPQCAHCHPCFHQWDQVVMSLQAELEGI
KRKVSDIIEGGLPDSFDEGRMKALEDKLAQIQELISSNGTSLQEQFNHVFQLENAIRREL
SQLSRKLEKIQRQLSNTELSNQEEREKLRALEDELRTLNESVHRFREQLKNAITSGFTET
VCGAPGHASCAESPCGGANCRDNLGNRVCGGKGCDGAVPTAVEALKKVQNVSKELTNKGA
ELDAVSQKIQQIQEEAQDTKEEVEKALSKAQEVKDRIASSTEELRNFIKKIKDFLNEEGA
DPESIELVARQVLNISLPASASDIAGVLKQIKDSISNVSNVDQILNATAENLQALKDLLK
RANEANPRKATANFVPLPDSCRRSVNDKVSAIGEKQMDAMNRLANLSKEVDELKNKMELN
RKMAAEAKEKADKAAVVAKDLNEVMEEVEKKYTKLKKQIEGLDDDSGDAASRVHKVKKEA
EDLLKKARSDLEKLKDLENKFQQNRKNMEEKIATLQELEQKANDLVQYIRNKSSAYASCT
S
NT seq 5226 nt   +upstreamnt  +downstreamnt
atgtacacattggattggcggcctggtcatctttcagaggacagcaaagcaaataaatta
agtctaacccctgctctgtattttaggtctcctcactgtgtgcatcgtgggaccaacgtt
atgaagccgaagctactggccaccatctttgttatggtctcagcgcagagtgccttggca
caggaccagccttcgttgccacagggctgcacagaaggaagctgctacccggcaacagga
aaccttctgattggccgagctcatggcctgagcgttacctccacgtgtgggctgcagggt
gctgaagagtattgcattgtcagccacctccaagattcagacaagtgcttttattgtcac
tcctacgacccacagcagagccaccagatccagaacgtgatctacctcacgaatgccgac
ggagagaagacctggtggcaggcagagaacggggtggagaaagtcagcatccgtctgaac
ctggaagcagagttccattttactcacctcatcatgaaattcaagacattccgccctgca
gctatgctgatcgagagatccgttgatttcggactcacctggaaagcgtaccgctacttc
tcctacaactgcaccaagatgtttcccggcatccggcagaccctcaggaaggttgatgat
gtcatctgcgagaatcgctactccgacatcgagccgtcaacagaaggagaagtgatttat
aaagttctggaccctgccgtcaccgtggaagacccttacagcctggagatacaagatctg
ctacgcatcacgaacctgcggatcaacttcaccaagctgcacaccctgggggacaacctc
ctggaccagcgtaaggaggtcctggcaaagtactactatgccgtctatgagctggtggtc
cgcgggagctgtttctgctatggccacgcttctgaatgtgcgccagtcgagggcgtgcgg
gttggagtcgaaggaatgatccacgggaggtgtgtttgcaaacacaacaccaaaggatta
aactgcgagaactgtagggacttctaccatgacctgccctggagaccagctgaggccaac
aacccccacacgtgcagacagtgcgattgtaacaaccactcgaggaagtgccactttgac
atggcggtgtacctggccacggggaacgtgagcggcggagtttgcgacaactgtttacac
aacaccatgggccgcaactgtgagatctgcaagcctttctactaccggaaccccatggtg
gacatccggacagagggggcctgcatcccctgtgactgtgacccggtgggctccctggac
gggggcatctgcgacagtcacacagacttcaacctgaggatgctcgccggccagtgccgc
tgtaaggagaacgtgaaagggactcgctgtgacagctgcaaggagggtttctatgggctg
agcgagaatgatccccaggggtgccagccttgcaggtgtgacccccgggggatcgttctc
agcgggccaccgtgtgatcagatcagcggagactgctactgtaagagatacgtcacaggg
cgctactgcggccagtgcctgcccgagtactggggcctcagcagtgacatcacgggctgt
cgaccatgcgactgtgactttggaggggcctataacaacagatgcttgatggagaatggg
cactgtgactgccgccctcacctcattggccgacagtgtgacgacgtgcagcttgggtat
ttctgcatgccactggattattacacatacgaggcagaggacgcaacgccccattcccct
acggatcaagaactaccgggagagcccagaccagaagcacagaacgactgcttggaatac
tacaacggagttcggaacgggcgaagcgtgaggctgcgccgaccgcagggcattgcccgg
gctctgcagcagcgggcagcgctgcgtcggacccggcagcttcagcgcaagccggatgtg
gagaccatccgtaggccgcaggctcctaataagatgatcacatggaccggccctggattt
gctagagtgaaggacggggcgggactggtgtttaagattgacaacatcccttactccatg
gagtacgacatcatgatccgatacgaacctgagtcagcagagaactggcaagccatagtg
agcatcacctccgagtctttgcccatgagccaccgctgtggaaatatcctgccttcggag
caaatgtacagcgtctcgcttcagcaccagcagaggtatctggtgctgcccaggcccttc
tgttttgagaccaacaatcgctacataatcgctatccgattccagcgggatgacgccaaa
cacaggcatgtgaccgcattcatcctaatcgactcgctggtcctcttgcccaagtacacg
gagctgcctggttttcacggtaatgacccgagctctgtacatcaccgagaagagatggaa
cgctacatgtgcttggactccttcaagatggccaccatgcctacgctggcggagatgtgc
atcaaactcatctgcagcgtctctgctataatacacgatggggcgctgccatgtgaatgt
gatcctcagggctccaccagtgcagtctgcgaaaagatcggagggcagtgtaaatgcaag
cccaacgtcattggccggcactgtgaccagtgcgctccagggacgtacggctttggcccg
tccggatgctatccttgtaactgtcactcccatgggtcagtcagtgatatctgtgacccc
tcctctggtcagtgtcgatgccagcatggtgccattgggcgccagtgtgaccagtgcttg
cccgggcagtggggcttcccgaactgtcggccttgccagtgtaacagtcactcagaggtt
tgcaactcaaagacagggacctgtatggactgccgtgactataccactggacgccactgt
gagaggtgtctggatggatactttggcaacccggtcctgggctctggagagcagtgccgt
ccgtgtccgtgccctaggtaccctgggagtggacattaccatggcaactcgtgcgacatg
gaccaggaatccaatgaaattgtttgccactgtgttcctggatacacaggtcttcggtgc
gatcgctgctctcctgggtattttgggaatcccgcgctggaaggcagtgtctgccgtccc
tgccaatgcaacaacaacattgagaccagcgacccgggggcatgcgacccccagaccggc
acgtgcctcaggtgtctcttcaacactgacgggccgagctgcgccgagtgcaaactgggt
tactatggaaacgccctactccacagctgtcggcagtgcacttgtaacctacaggggacg
ctggactcccattgcacccaggacggctgctactgtgacagggtgacaggaaactgcccc
tgccggccgaacgtgattggcaggaactgcgaccagtgtgcgcccaatcactgggatttc
agccagggacccggctgccagccctgtgcatgcaacgtcgtgcatgctgtcgctccgagc
tgcaacatggtgagaacacataccagcacatcctgcgactgtgacatcaacggtgtggaa
acactgcagtgtaaccacagcacgggccagtgctactgtcgggaaggcgtcacggggccc
atctgcaatcagtgcgcccgcggcttccacgggaacttcccccagtgcgcccactgccac
ccctgcttccaccagtgggaccaggtggtcatgagcctacaggcggagctggaggggatc
aagaggaaggtgtcggatatcatcgagggaggactccccgacagcttcgacgagggcagg
atgaaagccctggaggacaaactcgcacagattcaggaactaatcagcagcaacggaacc
agcttacaggagcagttcaaccacgtctttcagctggagaacgcaatcaggcgtgagctc
agtcagctctctaggaagctggagaagatacagaggcagctgagcaacacagagctgagt
aaccaggaggagagggagaaactgcgtgcactggaggacgaactgaggacgctgaatgaa
tccgtccaccgctttagggagcagctgaagaatgccatcacctcaggcttcacagaaacg
gtctgcggagcccctggtcatgcaagctgtgctgaatcgccttgtggaggcgctaactgc
cgggataatttgggaaaccgcgtgtgcggtgggaagggctgtgatggtgccgtgcccact
gctgtggaggcactcaagaaagtacagaacgtgagcaaagagctgaccaacaagggtgcg
gagttggacgccgtctcccagaagatccagcagatccaggaggaagcgcaggacacgaag
gaggaagtggaaaaggccttgagcaaggcgcaggaagtcaaggatcgcatcgccagctca
actgaagaactgcgaaacttcatcaaaaaaatcaaagactttttgaacgaggaaggcgcc
gacccagagagcattgagctggttgccagacaggtgctgaacatctctctcccagccagc
gccagcgacatcgccggagtcctgaagcagatcaaggacagcatctccaacgtcagcaac
gtggatcagatcctcaatgccaccgccgagaacctccaagccctgaaagatctgctgaag
cgagctaacgaagcaaaccctaggaaagctacagccaatttcgtgccccttccagacagc
tgtcggagatcagtcaatgacaaggtgagcgccattggagagaagcaaatggacgctatg
aaccgcttggccaacctctcgaaggaggtggacgagttgaagaataagatggagctgaac
aggaagatggcggcagaggcaaaggagaaggcggataaagcagctgttgtggccaaggat
ctgaatgaggtgatggaggaagtggagaagaagtacactaagctgaagaaacagattgag
ggtctggacgacgactcgggggatgccgccagcagagttcacaaggtcaagaaggaagcg
gaggacttgctgaagaaagccagaagcgaccttgagaaactcaaagatctggagaataaa
ttccagcagaacagaaagaacatggaagagaagatcgccacactgcaggaactggagcag
aaagccaacgacttggtccagtacatccgcaataaatccagcgcctatgcctcctgtacc
tcctaa

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