Latimeria chalumnae (coelacanth): 102358313
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Entry
102358313 CDS
T02913
Symbol
GGPS1
Name
(RefSeq) geranylgeranyl diphosphate synthase 1
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm00900
Terpenoid backbone biosynthesis
lcm01100
Metabolic pathways
Module
lcm_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
102358313 (GGPS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lcm01006
]
102358313 (GGPS1)
Enzymes [BR:
lcm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
102358313 (GGPS1)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
102358313 (GGPS1)
2.5.1.29 geranylgeranyl diphosphate synthase
102358313 (GGPS1)
Prenyltransferases [BR:
lcm01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
102358313 (GGPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
102358313
NCBI-ProteinID:
XP_005993392
Ensembl:
ENSLACG00000012397
UniProt:
H3AWR3
LinkDB
All DBs
Position
Un
AA seq
302 aa
AA seq
DB search
MEDKGVAAERILLEPYKYLLQLPGKQVRTKLAQAFNHWLNVSDDKLQVIIEVTEMLHNAS
LLIDDIEDNSKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKVFTSQLL
ELHRGQGLDIYWRDTYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSEYKNNLKPLINTL
GLFFQIRDDLANLRSKEYTDNKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTEN
VDVKKYCIDYLEKVGSFEYTKQTLRDLETVAYRQIEELGGNPHLAALVKLLGEMYREKAN
QN
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaaggagtagcagctgagagaattctccttgaaccttataagtacctgctc
caactaccagggaaacaagtgaggaccaaacttgcccaagcatttaatcactggctgaat
gtttccgatgataaactacaggttatcattgaagtgactgagatgttacacaatgctagt
ttgcttattgatgacattgaagataactccaagctacgacgtggctttcctgtggcacat
agtatctatggggttccatcagtaataaattctgccaattatgtttatttcttgggtctg
gagaaagtgttgactcttgaccacccagatgctgttaaagtgttcacgagtcagcttctg
gagcttcaccgtggccaaggcttggacatttactggagagatacctacacctgccccaca
gaggaggagtacaaggctatggttttacaaaaaacaggaggactttttggactagctgta
ggcctcatgcagcttttttctgaatataaaaacaatttaaagccccttattaatactctt
gggctcttcttccaaatccgagatgatcttgctaatttaagatccaaagagtacactgac
aataaaagcttctgtgaagatttgacggagggcaaattttctttccctacaattcatgct
atatggtctagaccagaaagtacccaagtccagaatattctccggcaaaggacagaaaat
gtagatgtaaagaaatactgcatagattatcttgaaaaggtgggttcctttgagtacaca
aagcagactttgagagatcttgaaactgtagcctataggcagattgaggaacttggaggt
aacccacacttagcagctttagtaaaactactaggtgaaatgtacagagagaaagcaaac
caaaattag
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