KEGG   Latimeria chalumnae (coelacanth): 102358313
Entry
102358313         CDS       T02913                                 
Symbol
GGPS1
Name
(RefSeq) geranylgeranyl diphosphate synthase 1
  KO
K00804  geranylgeranyl diphosphate synthase, type III [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm00900  Terpenoid backbone biosynthesis
lcm01100  Metabolic pathways
Module
lcm_M00367  C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    102358313 (GGPS1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:lcm01006]
    102358313 (GGPS1)
Enzymes [BR:lcm01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     102358313 (GGPS1)
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     102358313 (GGPS1)
    2.5.1.29  geranylgeranyl diphosphate synthase
     102358313 (GGPS1)
Prenyltransferases [BR:lcm01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   102358313 (GGPS1)
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-GeneID: 102358313
NCBI-ProteinID: XP_005993392
Ensembl: ENSLACG00000012397
UniProt: H3AWR3
LinkDB
Position
Un
AA seq 302 aa
MEDKGVAAERILLEPYKYLLQLPGKQVRTKLAQAFNHWLNVSDDKLQVIIEVTEMLHNAS
LLIDDIEDNSKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKVFTSQLL
ELHRGQGLDIYWRDTYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSEYKNNLKPLINTL
GLFFQIRDDLANLRSKEYTDNKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTEN
VDVKKYCIDYLEKVGSFEYTKQTLRDLETVAYRQIEELGGNPHLAALVKLLGEMYREKAN
QN
NT seq 909 nt   +upstreamnt  +downstreamnt
atggaagacaaaggagtagcagctgagagaattctccttgaaccttataagtacctgctc
caactaccagggaaacaagtgaggaccaaacttgcccaagcatttaatcactggctgaat
gtttccgatgataaactacaggttatcattgaagtgactgagatgttacacaatgctagt
ttgcttattgatgacattgaagataactccaagctacgacgtggctttcctgtggcacat
agtatctatggggttccatcagtaataaattctgccaattatgtttatttcttgggtctg
gagaaagtgttgactcttgaccacccagatgctgttaaagtgttcacgagtcagcttctg
gagcttcaccgtggccaaggcttggacatttactggagagatacctacacctgccccaca
gaggaggagtacaaggctatggttttacaaaaaacaggaggactttttggactagctgta
ggcctcatgcagcttttttctgaatataaaaacaatttaaagccccttattaatactctt
gggctcttcttccaaatccgagatgatcttgctaatttaagatccaaagagtacactgac
aataaaagcttctgtgaagatttgacggagggcaaattttctttccctacaattcatgct
atatggtctagaccagaaagtacccaagtccagaatattctccggcaaaggacagaaaat
gtagatgtaaagaaatactgcatagattatcttgaaaaggtgggttcctttgagtacaca
aagcagactttgagagatcttgaaactgtagcctataggcagattgaggaacttggaggt
aacccacacttagcagctttagtaaaactactaggtgaaatgtacagagagaaagcaaac
caaaattag

DBGET integrated database retrieval system