KEGG   Latimeria chalumnae (coelacanth): 102362189
Entry
102362189         CDS       T02913                                 
Symbol
XPO1
Name
(RefSeq) exportin 1
  KO
K14290  exportin-1
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03008  Ribosome biogenesis in eukaryotes
lcm03013  Nucleocytoplasmic transport
lcm03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102362189 (XPO1)
   03008 Ribosome biogenesis in eukaryotes
    102362189 (XPO1)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    102362189 (XPO1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcm03019]
    102362189 (XPO1)
   03009 Ribosome biogenesis [BR:lcm03009]
    102362189 (XPO1)
   03016 Transfer RNA biogenesis [BR:lcm03016]
    102362189 (XPO1)
   03036 Chromosome and associated proteins [BR:lcm03036]
    102362189 (XPO1)
Messenger RNA biogenesis [BR:lcm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     102362189 (XPO1)
Ribosome biogenesis [BR:lcm03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    102362189 (XPO1)
  Pre-60S particles
    102362189 (XPO1)
Transfer RNA biogenesis [BR:lcm03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    102362189 (XPO1)
Chromosome and associated proteins [BR:lcm03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     102362189 (XPO1)
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N DUF3385 Hydrolase_3 BspA_v DUF2465
Other DBs
NCBI-GeneID: 102362189
NCBI-ProteinID: XP_005989634
LinkDB
Position
Un
AA seq 1071 aa
MPAIMTMLADHAARQLLDFSQKLDINLLDNVVNCLYHGEGAQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYGLQILENVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDAGSV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD
FSSGQITQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLIYKFLNVPMFRNVSLKCLTEIAGVSVSQYEEQFVTLFTLTMMQLKQMLPL
NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRENLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQANGEIVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEE
YPEHRTNFFLLLQAVNSQCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQVLYTL
LQNVAQEDAAAQSFYQTYFCDVLQHIFSVVTDTSHTAGLTMHASILAYMFNLVEDGKIST
PLNPTNPVNNQMFVQEYVANLLKSAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTSDLFLEEREAALRHAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq 3216 nt   +upstreamnt  +downstreamnt
atgccagcaattatgacaatgttagcagaccatgcagctcgacagctgctggacttcagc
cagaaactagatatcaacctactggacaatgtggtgaattgcctgtaccatggagaaggt
gcacagcaaagaatggcacaagaggtattgacacacttaaaggaacatccagatgcttgg
acaagagttgatactattttggagttttcacagaatatgaacaccaaatattacggactt
cagatcttagaaaatgtgataaaaaccagatggaagattctaccaagaaaccagtgtgaa
ggaataaaaaagtacgtggttggtctaattatcaagacatcctctgatgcaggatctgta
gagaaagaaaaagtgtacattggaaaattgaacatgattctggttcagatattgaaacaa
gaatggcccaaacactggccaacttttatcagtgacattgtgggtgctagtaggaccagt
gagagcctgtgtcagaacaatatggtcattctcaaactactgagtgaggaagtatttgat
ttctccagtgggcagataactcaagtcaaagcaaaacacttaaaagacagcatgtgtaat
gagttttcacagatcttccaattatgtcagtttgtgatggaaaattctcagaatgcaccc
cttgttcatgcaaccttggagacattgcttagattcttaaactggattccgctgggctac
atatttgaaacaaaactgatcagtacactgatatacaagtttttaaacgtaccaatgttt
cgaaatgtgtctctgaagtgcctcaccgaaattgctggtgtgagtgtaagccagtacgag
gagcaatttgtaacgctgtttacactaaccatgatgcagttaaaacagatgcttcctttg
aacaccaatatccgattggcttatgctaatggaaaagatgatgagcagaatttcattcag
aacctcagcttgtttctatgcacattcttaaaagaacatggacagctaatagagaagaga
ttaaacctgagagaaaatttaatggaggctctgcattacatgttgcttgtatctgaagtg
gaagaaactgaaattttcaagatttgtcttgaatactggaaccatctagctgctgaactt
tatagagagtctccattttcaacatccacatcaccacttctctctggaagccagcatttt
gatgtacctcctagaaggcaactttatttacctgtgctgtcaaaggttcgtcttcttatg
gttagtcgtatggctaaaccagaggaggtactggtggttgaaaatgatcagggtgaagtt
gtacgagaatttatgaaggacacagactccattaatttgtacaagaacatgagagagact
cttgtataccttacacatttggactatgcagacactgaacgtattatgacagaaaaactt
cacaatcaagtgaatggtacagagtggtcctggaaaaacctgaacacactttgctgggct
attggctcaattagtggagctatgcatgaagaagatgaaaagaggtttttggttactgta
ataaaggatcttttggggctttgtgaacaaaagagaggcaaggacaataaagctattatt
gcttcaaacatcatgtacattgtgggacagtaccctagattcctcagagcacactggaaa
tttttgaagactgttgttaacaagctgtttgagttcatgcatgaaacccatgatggggta
caagatatggcttgtgacacctttattaagatagctcagaaatgtcgtcggcactttgtt
caggtgcaggtgggtgaagtgatgccattcatagatgagatcctgaacaatatcaacaca
atcatttgtgatcttcaaccacaacaggttcacacattttatgaagctgttggttacatg
attggggcacagactgaccaagcagtacaggagcatctgattgaaaagtacatgttgcta
cccaaccaagtgtgggacagtataattcagcaggcaaccaaaaatgttgacatactgaag
gacccagaaactgttaagcagcttggcagcattctgaaaacaaacgtacgagcatgtaaa
gcagttggccacccttttgtaattcagcttggaagaatttacttagatatgctaaatgtc
tacaagtgcctcagtgaaaatatatctgcagccatacaagcaaatggtgaaattgttacc
aagcaacctttgatcagaagcatgcgaacggtaaagagagaaactttgaagctaatttcc
ggttgggtgagcaggtccaatgatcctcaaatggtagctgaaaattttgttcctccactt
ttggatgcagtactaatagactatcagagaaatgttccagctgcccgagaacctgaagta
ttaagcaccatggctatcattgtaaataaactgggaggacacatcacagctgaaatccct
cagatatttgacgctgtgtttgaatgcactttgaatatgatcaacaaggactttgaggaa
tatccagaacatagaacaaatttctttctgctgcttcaagctgtaaattctcagtgcttc
ccagctttcctggctattcctcctgcacaatttaaactggttctggattcaatcatctgg
gcttttaaacataccatgagaaatgttgcagacacaggactgcaggttctttacacactt
ctacaaaacgtagctcaagaagatgcagctgctcaaagtttctatcagacatacttctgt
gatgttcttcagcacatcttttctgttgtaacagatacctctcatactgctggtttgaca
atgcatgcttcgattcttgcatatatgtttaacttggttgaggatggaaagatcagtaca
ccactaaatccaacaaatccagttaataaccagatgtttgtacaggagtatgtggctaat
cttttaaagtctgctttcccacacttacaagatgcacaagttaaagtgtttgtaacagga
ctcttcagcttgaatcaggatattccagcattcaaagaacatcttagggactttttagtg
caaatcaaggagtttgctggtgaagatacttctgacctgtttctggaagaacgagaagca
gctcttcgacatgctcaagaggaaaaacacaaacttcagatgtctgtcccaggcatcctt
aatccacatgaaattcctgaggaaatgtgtgattga

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