Latimeria chalumnae (coelacanth): 102366070
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Entry
102366070 CDS
T02913
Symbol
CLP1
Name
(RefSeq) cleavage and polyadenylation factor I subunit 1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102366070 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcm03019
]
102366070 (CLP1)
Enzymes [BR:
lcm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
102366070 (CLP1)
Messenger RNA biogenesis [BR:
lcm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
102366070 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
TniB
PduV-EutP
AAA_22
AAA_16
ATP_bind_1
MMR_HSR1
nSTAND3
AAA
AAA_24
SRP54
AAA_18
CbiA
SRPRB
Roc
Motif
Other DBs
NCBI-GeneID:
102366070
NCBI-ProteinID:
XP_006012987
Ensembl:
ENSLACG00000003160
UniProt:
H3A1M6
LinkDB
All DBs
Position
Un
AA seq
424 aa
AA seq
DB search
MAEEQKSDKQQNKFELEKEMELRFEVEAGESVQLELLSGLAEVFGTELTRNKKFTFDGGS
KVAVFTWHGCAVQLTGRTEVVYVSKETPMILYLNAHAALEQMRRQAEREDDRGPRVMLVG
PTDVGKTTLCRLLLNYAVRLGRRPTFVELDVGQGSISIPGTMGALYIERPADLEEGFSVQ
APLVYHFGSTSPGTNIKLYNKITSRLAEVFNQRCEFNRKAGVSGCVINTCGWVKGSGYHA
LVHAASAFEVDVVIVLDQERLYNELKRDLPHFVRTILLPKSGGVVERSKDFRRESRDEKI
REYFYGFRGSFFPHAFDVKFADVRIYKIGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRDL
VHHLLSMSTADSVEENIIETSVAGFIVVTGVDTERQVFTVLSPAPRPLPKNILLIMDIRF
MDLK
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagagcagaaatcggacaaacagcagaacaagtttgagctggagaaggagatg
gagctgcgttttgaggtggaggcaggtgaatctgtccagctggagctgctctctggcctg
gctgaggtctttggcaccgagctgacccgtaacaagaagttcacctttgatggggggtcg
aaggttgccgtcttcacctggcacggctgtgcggtgcagctcacgggtcgcacagaggtg
gtctatgtctccaaggagactcccatgatcctctatctcaacgctcatgccgcgctggag
cagatgcggcgacaggcagagcgggaggacgaccggggcccaagagtgatgctggtgggt
cccactgacgtgggcaagaccactctgtgccgtttgctactgaactatgcggtgaggctg
gggcggaggccaacctttgtggagctggatgtggggcaagggtccatctccatccctggc
acaatgggggcactgtacatcgaacggcctgccgacctggaggaagggttttctgtgcaa
gctcctcttgtctatcacttcggatccaccagccccggcaccaatatcaaactctacaac
aagattacttcccgtctggcggaggtttttaatcagcgctgtgaattcaaccggaaggct
ggtgtcagcggctgcgtcatcaacacctgcggctgggtgaagggctcgggctaccatgcc
ctggtccatgctgcctcggccttcgaggtggacgtggtgattgtcctggatcaggagcgc
ctctacaatgagttgaagcgtgatctcccgcacttcgtccgcaccatcctgctgcccaag
tccggtggtgtggtggagcgctccaaggacttccggcgggagagccgggatgagaagatc
cgtgagtatttctatggcttccgcggcagcttctttccacacgcctttgatgtgaagttt
gcagacgtgcgcatctacaagattggtgcccccaccatcccggactcttgcctgccgctc
gggatgtcgcaagaggacaaccagctgaagctggtccccgtcacaccaggccgcgacctg
gtacatcatttgctgagcatgagcacggcggacagcgtggaggagaacatcattgagaca
agcgtggcagggttcattgtggtgacgggcgtggacacggagcgacaggtcttcaccgtg
ctctcaccagccccccggcccctgcccaagaacatcctcctcattatggacatccgcttc
atggacctgaagtga
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integrated database retrieval system
