KEGG   Latimeria chalumnae (coelacanth): 102367228
Entry
102367228         CDS       T02913                                 
Symbol
POLR2K
Name
(RefSeq) RNA polymerase II subunit K
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03020  RNA polymerase
lcm03420  Nucleotide excision repair
lcm04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    102367228 (POLR2K)
  09124 Replication and repair
   03420 Nucleotide excision repair
    102367228 (POLR2K)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    102367228 (POLR2K)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lcm03021]
    102367228 (POLR2K)
   03400 DNA repair and recombination proteins [BR:lcm03400]
    102367228 (POLR2K)
Transcription machinery [BR:lcm03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     102367228 (POLR2K)
  RNA polymerase III system
   RNA polymerase III
     102367228 (POLR2K)
  RNA polymerase I system
   RNA polymerase I
     102367228 (POLR2K)
DNA repair and recombination proteins [BR:lcm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      102367228 (POLR2K)
SSDB
Motif
Pfam: DNA_RNApol_7kD A2L_zn_ribbon MCM_OB DUF5816 Cytochrome_C7 HypA DZR zinc_ribbon_13 DUF2252
Other DBs
NCBI-GeneID: 102367228
NCBI-ProteinID: XP_005995432
Ensembl: ENSLACG00000015753
UniProt: H3B7L1
LinkDB
Position
Un
AA seq 59 aa
MDPQKDIMQPPKQQPMIYICGECHTENEIKARDPIRCRECGYRIMYKKRTKRLVVFDAR
NT seq 180 nt   +upstreamnt  +downstreamnt
atggatccgcagaaggatattatgcagcccccaaagcagcagccaatgatttatatttgt
ggagaatgtcatactgaaaatgaaatcaaagccagagatccaatcagatgcagagaatgt
ggttacagaataatgtataagaaaagaactaagaggcttgttgtttttgatgctcgatga

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