Larimichthys crocea (large yellow croaker): 104917659
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Entry
104917659 CDS
T04659
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04010
MAPK signaling pathway
lco04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104917659
04020 Calcium signaling pathway
104917659
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104917659
Ion channels [BR:
lco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104917659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
104917659
NCBI-ProteinID:
XP_019118401
LinkDB
All DBs
Position
XII:complement(810669..957845)
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AA seq
2525 aa
AA seq
DB search
MTDGEGRARFQYAECPEGQEQQQEEVQEEVRLAIPTAYRKDNPGHDVDPGGGHDDVEEEE
EEEEDVQSGQGEGIEWSPEVQEHEDQEPELEVEVGPTLGVRITAPIRDPDCVSEEEEQQP
YPALSPVAFFCLKQTTRPRNWCLRVVCNPWFEHISMLVILLNCVTLGMFQPCEDVDCHSD
WCRILQVLDDCIFAFFAVEMVIKMVALGIFGPNCYLGDKWNQLDFVIVMAGVMEYSLDGH
NASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQL
WAGLLRNRCFLGEDIRTMYNLSISPYYMSEEGEDSPFICSAARENGMRRCRDVPAYNDGR
EDCSLDAHQSTALIGSAPVVGGASVNGCINWNKYYNVCSPGDLNPHKGAVNFDNIGYAWI
AIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRE
NALMREQRARYMSNDSTLASYSEPGSCYEEMLRYISHLYRKLTRRLQRIYSGWHSKRRKK
VNPNGSGGGSNGGGNGHGHGSSRGCGGLGPGSSLWLRPIHNLLQHHQHQHCRLSNGGQHT
ISVTTAEHMDGEGGEELEMKSLPVRRGSTNGNSSGGGGGNPSVVTQGMGALLGRLNGGMN
YPTILPSFVCSYSSKTPPPHSQCGHSPEQHPPNHPASEHTETLNKLYQLMGQHRRQRLLY
QLAGVVPSPLLLELLSCPLCARSLETLELELGDLEGEADGLHDFPQSGDLRGGRGRCRRR
GVVEYKNGVVRAWVGFREKLKRIVESKYFNRGIMIAILVNTLSMGIEYHEQPEELTDVLE
ISNIVFTSMFVLEMGFMLLAFGLFGYIRNPYNIFDSIIVIISVWEIIGQADGGLSVLRTF
RLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCMLLMLFIFTFSILGMHLFGCKFSLKME
NGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPWAALYFVALMTFGNYVL
FNLLVAILVEGFQAEGDANRSESDDEKKSDNFEEDEKVEQLRDTELKMYSLMMTANGHVD
PRGSMAPPIIMRTAATPMPTPKGSLGPDSILGDDLIYREGVSQYVEVGLGFSEAGISHIE
SRRGSSTSMEPLAYDQHSLSLSSPGRRSPLPPRSWGSRRSSWNSLGRAPSLKRRDTSGER
ESLLSGEGGEEEDSGEDKGEAGANNRLRPEPLELLQASTLCPSIIAEYSDCNGRTLTYDP
TANTDPKEDSSPEDDTDDESSVCSWIKKELRNMKPRWCKEHEDWTLYLFSPESLLRAWCQ
SVISHKMFDHVVLVFIFLNCITIALERPEIQPQSTERVFLSVSNYVFTVIFLAEMAIKVV
ALGFCFGKQTYLQSSWNVLDGVLVFVSLVDILVSLAYTGGNRILGILRVLRLLRTLRPLR
VISRAPGLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFYHCEGLDTKNIT
NKSDCLQANYRWIRRKYNFDNLIQALMSLFVLSCKDGWVNIMYDGLDAVGVDQQPVRNHN
PWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQDQEEEEARLREEKRLKMIEKKRRSK
ENEGAEAKQRPYYADYSPLRLSIHTLCTSHYLDLFITFIICINVFTMSIEHYNQPQYLEE
VLKYCNYVFTCIFVIEALLKLAAFGIHRFFKDRWNQLDIAIVALSIMGITLEELKMSAAL
PINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVMQALPQVGNLGLLFMLLFFIYAALG
VELFGKLDCNDNNPCEGLSRHATFKNFGMAFLTLFRVSTGDNWNGIMKDTLRDCQPEDQH
CLTYLPLVSPIYFVTFVLMAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIALEMAME
RQRKLSTTSSNSSVGGTYVGPCPHSPGQEEEVQYGDQDLLSPRKMSVSRMHSLPNDSYMF
RPVRPASAPYPLEEVVHSPHHQHSGSVTSVHSQPCDSRTLLQVPDISPVHPRSPPTLTLP
RIAPPTPSPSPRALRRQVAVKLDSVESQGCEQQKRPNPIHLPPPSPSPLSPHTSSPSPLP
PPPPSSPSALSLPPCSPTAFPLPPPSPLPSLLSSHSPLPPPPSSPSLLLPPPPSPRLPLR
PPSLRRPRPPSAASFCDPADEEVYHITSSACHRWRDEEGGGQECRGKAGRSHSLSPYCTP
LSLDSTSSPLPPLPPSSSRSALSLLGVGLKERDFRKGLSIDNQGFLDKPPSLSASYSDDQ
RRHSIEVCLPQAVTSDDPHFTREAHRSEKGGQAFPVRVQSFGGGHRKKKMSPPCISIHPP
SEREHPEIASPPKLADCSMMLRRRTPSYDLTPHTQPNTQDVSAESHMRAQMHSPMHTVLT
PIHVPLQAHSPTHTQAYTPPHASTPTPPHIPISPNIFIQPHAPLLPNTMPFSQTHSRSPT
AARHSPLTGEYIPLPQFTFDQPQSRYMSGLSAGLSDADSATCSSPFDNRLGSGAGFSAKN
RRTAQ
NT seq
7578 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgaggggagagcgcgctttcagtacgcagagtgcccggaggggcaggag
cagcagcaggaggaggtacaggaggaggtgaggctcgctatacctacagcctacaggaag
gacaacccgggtcatgatgttgatcctggaggaggccatgatgatgtggaggaagaagag
gaggaggaggaggacgtgcagagtggtcagggcgaaggaatagaatggagtcctgaggtt
caggagcatgaagatcaggaaccagagctggaagtggaagttggaccaacattgggagtt
cgcatcacagctcctattcgtgatccagactgtgtctctgaggaggaggagcagcagcca
tacccggcactctcccctgtggccttcttctgcctaaagcaaacaacgaggcctcgcaac
tggtgtcttcgcgtggtttgtaacccgtggttcgagcacatatccatgttggtgatcctg
ctcaactgtgtcactctggggatgttccagccttgtgaagatgttgactgccattcagac
tggtgccgcatcctacaggtactggacgactgtatctttgctttcttcgctgtggaaatg
gtcatcaagatggtggccctgggaatctttggccccaattgttaccttggcgacaagtgg
aaccaactcgactttgtcatcgtcatggcaggggtgatggagtattctctggatggtcac
aatgccagtctgtcagccatccgtaccgtccgagtactcaggccactgcgggccatcaac
agagtgccaagtatgcggatcttggtgacgctgctgttggacaccctgcccatgcttgga
aatgtccttctcctctgcttctttgtctttttcatctttggcatcgtgggagtccagctg
tgggcggggctacttcgcaaccgctgcttcctgggagaggacatcagaacaatgtacaac
ttgtccataagtccttactacatgtccgaggaaggggaggacagcccatttatctgctcg
gctgcccgcgagaacgggatgcggcgctgccgcgatgtgccggcctacaacgatggcagg
gaagactgctcgttggacgcccaccaaagtacagctctgatcggatcagcacctgtcgtg
ggtggggccagcgttaatggttgcattaactggaacaagtactataatgtgtgtagcccc
ggggacctcaaccctcacaaaggagctgttaactttgacaatatcggctacgcctggata
gccatattccaggtcatcacactggaaggatgggtagatatcatgtactatgtcatggac
gctcactccttctacaattttatatattttatactgctcattatcgtgggctctttcttc
atgatcaacttgtgcctcgtggtcatcgccacccagttctccgagacaaagcaaagagag
aacgccctgatgagggagcagcgtgctcgctacatgtccaacgactccacgctcgccagt
tacagcgaaccgggctcatgctacgaggagatgctgcgttacatcagtcacctttaccgg
aagctgacccgtagactgcagaggatatactctggatggcacagtaaaaggcgtaaaaag
gtgaatcctaatggcagtggcggaggcagtaacggcgggggtaatggacacggccatgga
tccagcaggggctgcggaggcttaggcccgggtagctcattgtggctgagaccgatccat
aacctcctgcagcaccatcagcaccagcactgtcgcctcagcaacggggggcagcacaca
atcagtgtgacaaccgccgagcacatggacggagagggcggggaggagctggagatgaaa
tcgcttcctgtccggagaggaagcacaaatgggaatagcagcggtggtggtggtgggaac
ccgtctgttgtcacccagggcatgggggcgttgttgggacggctgaacggggggatgaac
tatccgaccattctgccgtcgtttgtgtgcagctacagcagtaagacgccgcccccccac
tcccagtgtgggcacagtccagagcagcacccaccaaaccacccggcgtctgaacacaca
gagacgctgaacaagctctaccagctcatgggacagcacagacgccagcggctgctgtac
cagctggcaggcgtggtgcccagccctctgctcttggagctgctcagctgccctctatgt
gcccgcagcctggaaaccttggagctggaactgggagacctggagggagaggctgatgga
ctgcacgacttcccccagagtggggatctgagaggcgggcgaggccgctgcagacggcgg
ggggttgtggagtacaaaaacggagtggtgcgtgcctgggtaggcttcagggaaaaactg
aagaggattgtggaaagtaaatacttcaaccgagggatcatgatcgctatcctagtcaat
actctcagcatggggatagagtaccacgagcagcctgaagagttgactgatgtgttagag
atcagtaacatcgtcttcaccagtatgtttgtcctggagatgggcttcatgctgctggcc
tttggcttgtttggatacatcaggaacccatacaacatattcgacagcatcattgttatc
atcagtgtgtgggagataatcggtcaagctgacggcggtttgtcagtcctgcgaacattt
cgtctgctgcgggttcttaagctggttcgcttcctgcctgccctgaggagacaactggtg
gtgctgatgaaaaccatggacaatgtggccacattctgcatgctgctgatgcttttcatc
ttcactttcagcatactgggtatgcatctgtttgggtgtaaattcagtcttaagatggag
aatggagacaccatccctgaccgcaagaactttgactctctactctgggccatcgtcact
gtattccagattcttacccaggaggactggaatgtggtgttgtacaacggcatggcctcc
acctccccatgggcggctctatactttgtcgctctcatgacatttggcaactacgtgctc
ttcaatttgcttgtggccatcttggtcgagggcttccaggctgagggtgatgcaaatcgg
tcggagtcagacgatgagaaaaaatcggacaactttgaggaggacgagaaggtggaacag
ctccgagatactgagctaaaaatgtactccctgatgatgactgccaacggccacgttgac
cctcgcggctccatggctcctcctataatcatgcgcacggcggcgacacccatgcccact
ccgaagggctctctgggacccgattccatcctcggagatgacctcatatacagagagggg
gtgtctcaatatgtggaggtgggactgggcttctccgaggcaggaatcagtcacatagag
tctcgccgtgggagctccacctccatggaacccttagcctatgaccagcattctctgagc
ctctcaagtcctggccggcgctcccctcttcctccccggtcatggggaagccgtcgctcc
agctggaacagcctgggaagagcgccgagcctaaaaaggcgagacaccagcggggagagg
gagagcctgttgtccggggagggaggcgaggaggaggatagtggggaagacaagggggag
gctggggccaacaacagactacgcccggagcccttggagctgctgcaggcgtctacgctc
tgcccttccataatagcggagtacagcgactgtaatgggaggaccctgacctatgacccc
accgcgaacactgaccccaaggaagactcctcgcccgaggatgacacggatgatgaaagt
tctgtgtgctcctggatcaaaaaggagctccgtaacatgaagccccgctggtgcaaagag
catgaagactggactctgtatttgttctctccggagagcctgttacgtgcttggtgccaa
agtgtgatctctcacaaaatgttcgaccacgtggttctggttttcatcttcctcaactgc
atcaccatcgctctggaaagacctgaaatacagcctcagagcactgagcgagtctttctg
agtgtgtccaactacgttttcactgtgattttcctggcagagatggccattaaggttgta
gctctcggtttctgctttggaaagcagacctacctccagtccagctggaacgttctggat
ggtgtgttagtgtttgtgtctctcgtcgacattctggtttctctggcctacactggcgga
aacaggatcctgggcatcctcagagtcctacgcctgctacgaacactacgcccactgagg
gtgatcagccgagccccgggattgaagcttgttgtggaaacgctcatcacctctcttaga
cccatcgggaacattgtccttatctgctgcgccttcttcattgtctttggcatcttgggg
gtgcagctgttcaaagggaagttctaccactgtgaaggtctggacacgaaaaacatcacc
aacaagtctgactgtctgcaggccaactaccgctggatacggaggaagtacaactttgac
aacttgattcaggctctgatgtctttgtttgtgctgtcctgtaaggacggctgggtcaac
atcatgtatgacggtctggatgcggtgggagtggaccaacagcccgtaaggaaccacaac
ccctggatgctgctctacttcatctcgttcctcctcatcgtcagcttcttcgtcctcaac
atgttcgtcggcgtcgtcgtggagaacttccacaagtgccggcaggatcaggaagaggag
gaggcgcgcctgcgagaagagaagaggctcaaaatgatagagaaaaagcgcaggagtaag
gagaatgaaggggctgaggccaagcagaggccttactacgccgactactccccactacgt
ctgtccatccacacactgtgtaccagccactacctggacctcttcatcaccttcatcatc
tgcatcaacgtcttcaccatgagcattgagcactacaatcagccacagtatttggaggag
gtcctgaagtactgcaactacgtgtttacctgcatcttcgtcatcgaggccctgctcaaa
ctcgcagcatttggcatacacaggttcttcaaagacaggtggaatcagctggatatagct
atagtggcgctgtccatcatgggcatcaccttggaggagctgaaaatgagcgcagcactg
cccataaatcctaccatcatccgaatcatgagagtactcagaatagcacgagtgctcaaa
cttctgaagatggccacggggatgagagctctgctggatacggttatgcaagcgctgcca
caggtgggaaatcttggtctcctcttcatgctgctcttcttcatctatgctgcgctggga
gtggagctctttggcaaactggactgcaatgacaacaacccatgtgagggtctgagtcgt
cacgcaaccttcaagaactttgggatggccttcctcacactgtttcgagtgtcgaccgga
gacaactggaatgggattatgaaagacacgttaagagattgtcaaccagaggaccagcac
tgtctcacctacctgcctttggtctctccaatttactttgtcacctttgtgctcatggcc
cagtttgtgctggtcaatgtggtagtggccgttctgatgaaacatctagaggaaagcaac
aaggaggctaaagaggatgcagagatggatgcagagatcgccttggaaatggctatggag
aggcaacgcaaattaagcacaacctccagcaacagttctgtgggagggacctatgtcggg
ccatgtccacattcacctggacaggaggaagaggtgcagtacggcgaccaggacctgctg
tctccaagaaagatgtctgtatccaggatgcactctctgcctaacgacagctacatgttc
cgtcctgtacggcctgccagcgccccctaccctttggaggaggtagttcacagtccccat
caccagcattcaggctcagtgacgtcggtccactcccagccatgtgacagtcgcacgctg
ctgcaggttccagacatttccccggttcatccccgatcacctcccaccctcactctgccc
cgcatcgcccctccaacaccgagcccctctccacgggccctgcgcagacaggtggcagtt
aaactggattcagtggagtcccagggttgtgagcaacagaagaggcccaaccccatccat
ctgcctcctccctccccttctcctctctctcctcatacctcctcaccgtctcccctgccg
cctcctcctccctcctcgccctcagccctctctctcccaccctgctcccccaccgccttc
ccactcccaccaccgtctcctttgccctctctactgtcatcccactctcccctccctcct
ccgccatcctctccctcgcttctccttccaccgcctccctccccgcgtctccccctgcgc
cctcccagtctccggagacccagaccgccctctgctgcgtccttctgcgaccccgcggac
gaggaggtgtatcacatcaccagctctgcctgccacaggtggagagacgaggagggagga
gggcaggagtgcagggggaaggccggccgcagccactccctctccccctactgcaccccg
ctctctctggactccacctcctcccctcttcctccgctgccgccttcctcctcgaggagc
gcgctcagtctgcttggggtcggattgaaggagcgtgacttcagaaagggtttaagcatc
gacaaccagggcttcctggacaagccgccatcgttgtctgctagttactctgacgaccag
cggcgccattctatcgaggtctgtctcccacaggctgtcaccagtgacgacccacacttc
acacgtgaagcccaccgctcagaaaaaggtggtcaggcatttcctgtgagggtgcagtca
ttcggaggcgggcacagaaagaagaagatgagtccaccttgtatatccatccacccgccc
tcagagagggaacaccctgaaattgcctcacccccaaagctggccgattgcagtatgatg
ctgagacgcaggacaccgtcctatgacttgaccccacacacacagccgaacacccaagac
gtctcggcggagtcacacatgcgcgcacaaatgcactccccgatgcacaccgtgctcaca
cccatccacgtacctctgcaagcacactcgccgacacacacccaggcgtacaccccaccg
cacgcgtccacacccacacccccacacatcccgatcagcccaaacatcttcatccagccc
cacgcgcctctcctccccaacacaatgcctttctctcagacacactcccgctcccccacc
gccgcgaggcactcccctctcacaggggaatacatccccctgccccagttcaccttcgac
caaccacagtccagatacatgagcggcctgtctgccggcctatcagacgctgattcagcc
acatgctcttcccctttcgacaacagactgggaagcggtgcggggttcagtgcaaagaat
aggaggaccgcccaatga
DBGET
integrated database retrieval system
