Larimichthys crocea (large yellow croaker): 104918672
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Entry
104918672 CDS
T04659
Symbol
dnmt1
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00270
Cysteine and methionine metabolism
lco01100
Metabolic pathways
Module
lco_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
104918672 (dnmt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104918672 (dnmt1)
03032 DNA replication proteins [BR:
lco03032
]
104918672 (dnmt1)
03036 Chromosome and associated proteins [BR:
lco03036
]
104918672 (dnmt1)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
lco02048
]
104918672 (dnmt1)
Enzymes [BR:
lco01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
104918672 (dnmt1)
Transcription factors [BR:
lco03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
104918672 (dnmt1)
DNA replication proteins [BR:
lco03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
104918672 (dnmt1)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
104918672 (dnmt1)
Prokaryotic defense system [BR:
lco02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
104918672 (dnmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
DNMT1-RFD
DMAP_binding
zf-CXXC
Motif
Other DBs
NCBI-GeneID:
104918672
NCBI-ProteinID:
XP_019108403
UniProt:
A0A0F8AEQ4
LinkDB
All DBs
Position
XII:9520046..9531941
Genome browser
AA seq
1507 aa
AA seq
DB search
MPSRTCLSLPEGVRKRLQVLDEDGVSDEDHVKEKLKLVQDFLHVDAQDQLTTLEEKMKSS
EISKEVYISKVKALLGKELHLENGSHVDDVEQNGKTNGFTNGSHKDEDSEDVTMDAQEEE
EAVKSPTGPKGKGGRRSKANSDTKKSPASTRVTRNSGKQPTIMSMFSKVQKRKSEDLNGE
ATNGQTEVKKEEDAPEESREEKRLKVDSDEKPAPEESKTESIKPVSTAKTPPPKCSDCRQ
YLDDSDLKFFQGDPDNALDEPEMLTDERLSLFDSNEDGFESYEDLPQHKITNFSVYDKRG
HLCPFDSGLIEKNVELYFSCVVKPIYDDNPCLDGGVPAKKLGPINAWWITGFDGGEKALI
GFTTAFADYILMQSSEEYAPIFALMQEKIYMSKIVVEFLQKNRDATYEDLLNKIETTVPP
AGLNFNCFTEDTLLRHAQFVVEQVESYDEAGDSDEQPIIVTPCMRDLIKLAGVTLGKRRA
ARRQAIRHPTKIEKDSKGPTKATTTKLVHQIFDTFFSDQIEQNDKESGGVKRQRCGVCEV
CQSPDCGKCAACKDMIKFGGSGKSKQACKQRRCPNLAVKEAEDDENIIEEDVPLEKAKKV
THAKRKKQTQCNLTWIGESVETEGKRQYYRKVCLNDEVLEVGDCVSVSSEDPTIPLYLAR
ITSLWEDLNGKMFHAHWFYRGIHTVLGESSDPLELVIVDECEDMHLSYIQGKVNVTYKAP
SNNWFMEGGMDVDLKVIEDDGKSFFYQFWYDTEFARFVTPPKTTPSEDCKFKFCGSCVRT
KARVEQEKPTAFEPLPDKDSDSKVLYAMACFKGLQFKVGDSVYMPPDTFNFSVKPASPVK
RSHRKEDVDEELYPEYYRKSSDYIKGSNLDAPEPFRIGRIKEIFHLRRSNGKPDVSEVKL
RLYKFYRPENTHKGVKASYHTDINQLFWSDEEVTVDMTEVLGRCQVEYAEDLNESVQDYS
SGGPDRFYFLEAYNAKSKGFEDPPNHARSAVHKGKGKGKGKGKGKGKASAPQEPQDSQSD
PQTLKVPKYRTLDVFSGCGGLSEGFHQAGISETLWAIEMWEPAAQAFRLNNPGTTVFTED
CNILLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSTFKNSLVVS
YLSYCDYYRPKFFLLENVRNFVSFKSSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTR
RRAIILAAAPGEELPRYPEPLHVFAPRACSLSVVVDEKKYVSNVTRGNGGIYRTITVRDA
MSDLPEIRNGAAALEISYNGEPQSWFQRQIRGTQYQPILRDHICKDMSALVEGRMRHIPL
APGSDWRDLPNIEVRLRDGTMTKKLRYTHSDKKNGRSSTGALRGVCTCSGGTPCDPADRQ
FNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVR
ECARSQGFPDTYRFFGNILDKHRQVGNAVPPPLSRAIGMEIKSCIRKRMKEEQASENVEQ
EKMEVSD
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgccatccaggacttgcctgtctctgccggagggtgtcaggaaaaggctgcaggtgctg
gacgaggatggagtttcagacgaggatcatgtaaaagagaagctcaagttggtgcaggac
ttcctgcacgtcgacgctcaggaccagctcaccaccctggaggagaagatgaaaagttca
gagatctcaaaggaggtctacatctctaaagtgaaggctttgctgggaaaagagcttcat
ctcgagaatggctcacatgtggatgacgtggaacagaatggaaagacgaatggcttcaca
aatggctcccacaaagatgaggacagtgaagatgtaaccatggatgcacaggaggaagag
gaggctgtcaagtcaccaactggccctaaagggaagggtggacggaggagcaaggcaaat
tctgacactaaaaagtctccagccagtaccagggttacaagaaacagcgggaagcagcca
actatcatgtcaatgttctctaaagttcaaaagcgcaagtctgaagacttgaatggagaa
gccactaatggacaaactgaagtgaagaaagaggaagatgctcctgaagagtctcgggag
gagaagcgtctcaaagtggactcagatgaaaagcctgctccagaagaatcgaagactgag
agtattaagccagtttccactgcaaagaccccacccccaaaatgttcagactgcaggcaa
tacttggatgactcagatctcaagttctttcaaggggatcctgataatgctctggatgag
ccagaaatgttaacagatgagcgcctctccctgtttgactcaaatgaggatggctttgag
agctatgaggatctgccacaacacaagatcacgaacttcagtgtgtatgacaagcgtggc
cacctttgtccatttgactctgggctgattgagaagaacgtggagctctacttcagctgt
gtcgtcaaacccatctatgatgacaacccttgtttggatggtggtgttcctgccaagaag
cttgggcccatcaatgcctggtggatcactggctttgatggtggcgaaaaagctttgatt
ggttttactacagcttttgctgattacatcctgatgcagtcaagtgaggagtatgcaccc
atctttgcactgatgcaggagaagatctatatgagcaagattgtggtggagtttctccag
aagaatcgtgacgctacttatgaagaccttcttaacaagattgaaacaaccgtacctcct
gcagggctaaactttaactgcttcactgaagatacgctgctgcgccacgcccaatttgtg
gtggagcaagtggagagctacgatgaggccggtgactcggatgagcagcccatcattgtt
actccctgcatgcgagacctgatcaagcttgcaggagtcactctcgggaagaggagagct
gccagaagacaggccattcgtcacccaacaaagatagagaaggacagtaagggaccaact
aaagcaaccactaccaagctggtgcaccagatcttcgacaccttcttctctgatcagatt
gaacaaaatgataaagagagtggtggggtcaaaagacagcgctgtggtgtctgtgaggtt
tgccaatctcctgattgtggcaagtgtgcagcttgcaaggacatgatcaaatttggagga
agtggcaaaagcaagcaggcttgtaagcaaaggagatgcccaaaccttgctgtaaaggag
gctgaagatgacgagaacattatcgaggaagatgttccattggagaaggccaaaaaggtt
actcatgctaagaggaagaagcagacccagtgcaacctgacatggatcggagagtctgtt
gagactgaagggaagaggcagtactacaggaaggtctgtctgaatgatgaagtgctggag
gttggcgactgtgtctcagtttcatcagaggatccaaccattcctctgtatctggcaagg
atcacatcactgtgggaggacctcaatggaaagatgttccatgcccactggttctatcgt
gggattcacacggtgctgggagagtcttctgatccgctggagcttgtcatcgtggatgag
tgtgaagacatgcatctcagttatatacaaggcaaagttaatgtcacgtacaaggcccca
tcgaacaactggtttatggagggtggcatggatgttgacctcaaggtgattgaagatgac
gggaagagtttcttctatcagttctggtacgacacagaatttgcccgctttgtgacacct
cccaagaccactccatcagaggactgcaagttcaagttctgtggcagctgtgtcaggact
aaagcgagagtagaacaggaaaagcctactgcatttgaacccctgccggacaaagacagt
gactccaaggttctgtatgctatggcctgctttaaggggttgcagttcaaagtgggagac
agtgtctacatgcctcctgacacttttaatttcagtgtgaagccagccagtccagtgaag
cgctcccataggaaagaggatgtggatgaggagttgtatccagaatattacagaaagtcc
tcagactacatcaaagggtcaaacctggacgctccagagcctttccgcattgggcgcatc
aaggagatcttccatctcaggcgtagcaacgggaaacctgacgtctcggaggtcaaactg
cgactctacaagttctacaggcctgagaacactcacaaaggtgttaaagcaagttaccac
acagacatcaatcagctgttctggagtgatgaagaagtgactgtcgacatgactgaggtg
cttggtcgctgtcaagtagagtatgcagaagacctgaacgaatcagtccaggactattcc
agtggtggacctgaccgcttctatttcctggaggcctacaatgcaaaatcaaaaggcttt
gaagaccctccgaatcatgctcgctccgctgtccataaaggcaaaggaaagggcaaaggg
aaaggtaaaggcaaaggaaaggcatctgctccacaagaaccacaagattctcagagtgac
ccacagacgcttaaagtgcccaaatatcgcacattggatgtgttctctggctgcggtgga
ctttctgaaggcttccaccaggctggtatctctgagactctgtgggccatagagatgtgg
gagcctgcagcacaggcctttaggctcaacaatcctggcaccacagtgttcactgaggac
tgcaacatcttactgaagttggttatgtctggagagaagaccaattctcttggccagaag
ctgcctcagaagggtgatgtggagatgctgtgtggaggacctccttgccaagggttcagt
gggatgaaccgcttcaactctcgcacctactccacattcaagaactcactcgtggtctcc
tatctcagttactgtgactactacaggcccaagttcttcctccttgagaacgtgaggaac
tttgtctcgttcaaaagctccatggtcctgaagctgactctacgctgtcttgtgcgcatg
ggctaccagtgtacttttggtgttcttcaggctggccagtacggtgttgcccagacgcgc
cgcagggcaatcatcctggctgctgctcctggagaggagctgcctcgttatcctgagcct
ctgcatgtgtttgctcccagagcttgctctctgagtgtggtggtggacgaaaagaaatac
gtcagtaatgttacacgaggtaatggcggaatctacagaaccatcactgtcagagacgcc
atgtctgacctgccagagattcgcaatggtgcagctgcattggagatttcctacaacggg
gagcctcagtcttggttccagaggcaaatcagaggcacacagtatcagccaattctcaga
gatcatatctgcaaggacatgagtgctctggttgaaggtcgaatgcgtcacatccccctc
gctccaggctccgactggagggatctgcccaacatcgaggttcgactgagagacggcacc
atgaccaagaaactgcgctacacacactctgataaaaagaatggacgcagcagcactggt
gcactcagaggtgtttgcacttgttcaggagggacaccatgtgaccctgctgacaggcag
ttcaacaccctgatcccatggtgtctgccccacactgggaaccgccacaatcactgggcc
ggactttacggcagactagagtgggacggtttcttcagcacaaccgtcaccaaccctgaa
cccatgggcaagcagggccgtgttcttcatcctgagcagcacagagttgtcagtgtgagg
gagtgtgcgcgttctcagggattccctgacacctatcgcttctttggaaacatcctggac
aaacacagacaggttggaaatgctgtgccccctccactctccagggccataggcatggag
attaagagttgtatcaggaagagaatgaaggaagaacaagcatcagagaatgttgaacaa
gagaagatggaggtctctgattag
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integrated database retrieval system
