Larimichthys crocea (large yellow croaker): 104921210
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Entry
104921210 CDS
T04659
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03022
Basal transcription factors
lco03420
Nucleotide excision repair
lco04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104921210 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
104921210 (cdk7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104921210 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lco01001
]
104921210 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lco03021
]
104921210 (cdk7)
03019 Messenger RNA biogenesis [BR:
lco03019
]
104921210 (cdk7)
03400 DNA repair and recombination proteins [BR:
lco03400
]
104921210 (cdk7)
Enzymes [BR:
lco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
104921210 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
104921210 (cdk7)
Protein kinases [BR:
lco01001
]
Serine/threonine kinases: CMGC group
CDK family
104921210 (cdk7)
Transcription machinery [BR:
lco03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104921210 (cdk7)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
104921210 (cdk7)
DNA repair and recombination proteins [BR:
lco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104921210 (cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Seadorna_VP7
ABC1
Kinase-like
Haspin_kinase
APH
Motif
Other DBs
NCBI-GeneID:
104921210
NCBI-ProteinID:
XP_010731975
UniProt:
A0A6G0IL78
LinkDB
All DBs
Position
III:complement(27643778..27649064)
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AA seq
343 aa
AA seq
DB search
MALDVKSRSKRYEKLDFLGEGQFATVYKARDKTTDTIVAIKKIKVGHRTEAKDGINRTAL
REIKLLQELHHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDTSLVLTPANIKAYILM
TLQGLEYMHQHWVLHRDLKPNNLLLDGSGVLKLADFGLAKAFGSPNRIYTHQVVTRWYRS
PELLFGARMYGVGVDMWAVGCILAELLLRIPFLAGDSDLDQLTKIFEALGTPTEETWPGM
SSLPDYVSFKIFPGTPLEHIFSAAGDDLLQLLQGLFTFNPSTRTTATQALKMPYFSNRPG
PTPGPQLPRPNCSVEALREKETIGQKRKIEGLETTVMKKKLIF
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgatgtaaagtccagatccaaacgatacgagaagctggatttcctcggagag
ggtcagtttgccacagtgtacaaagccagagataaaaccactgacaccatagttgccatt
aaaaagattaaggttggccacaggactgaggccaaagatggtattaacaggactgctctt
cgggagatcaaactgctgcaggagctgcatcatccaaatatcatcgggttgctggatgcc
tttggacacaaatctaacatcagtctggtgtttgatttcatggaaacggatctggaggtg
atcatcaaagacaccagcctggtcctgactccagccaacatcaaagcctatatcctcatg
actctacagggattagagtatatgcaccaacactgggtcctacacagggatctgaagccc
aataatctgctgttagacggcagcggagtgttgaagttggctgattttggtttggcgaaa
gcgtttggcagccccaacagaatctacacacatcaagttgttaccaggtggtaccgctcc
cctgagctcctgtttggtgccaggatgtatggtgtgggtgttgacatgtgggcagtggga
tgcattttggcagagttactacttcggataccattccttgctggagactcagatcttgac
cagctgactaagatctttgaggctcttgggacgcccacagaagagacatggcctggaatg
agtagtctaccagactacgtgtccttcaaaatatttcctggcacacctctggaacatata
tttagtgcagctggagacgacttactccagctgctacagggtctcttcacctttaacccc
tcaacgaggaccacagctacacaggctctgaagatgccgtacttcagcaatcgacctggt
cccacccctggaccccaacttccccgacccaactgttcagttgaggccctgagggagaag
gaaactatcgggcaaaagaggaaaatcgagggcctggagacgactgtgatgaagaagaag
ctaattttctga
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