Larimichthys crocea (large yellow croaker): 104921919
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Entry
104921919 CDS
T04659
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104921919 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lco03021
]
104921919 (polr1b)
Enzymes [BR:
lco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104921919 (polr1b)
Transcription machinery [BR:
lco03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
104921919 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
DUF1186
Motif
Other DBs
NCBI-GeneID:
104921919
NCBI-ProteinID:
XP_027133781
LinkDB
All DBs
Position
III:complement(46974424..46979970)
Genome browser
AA seq
1130 aa
AA seq
DB search
MDFSEKWSNVPKAPSLKNLTEGSFGALKETQHAAVQDLTKAHIESFDHAVTEGLSRVVQS
IPVLEFTFRKDRISLAFVDAALCSPVVSKGSISREMKVFPAECRGRKCSYKGKLVADVTW
SVNGVPKGTIKQTLGHLPIMVKSKLCNLYGMSPKELVEHHEEAEEMGGYFIVNGNEKVIR
MLIMPRRNYPIAMSRPKWKSRGQGYTQYGISMRCVKDEHSAINMNLHYLENGTVMLNFVY
QKELFFLPLGFVLKALVDFTDFQIYQELIKGREDNSFYKSCASEMLRIVMEEGCTTRSKV
LNYLGERFRVKLNLPEWYTNQQCANFLLDECICIHLKSDVEKFYLLCLMTRKLFTYAKQE
CMEENPDSIMCQEVLTPGQLYLMFLKEKLAGWLVSVKLLFEKKCHRLNTENVMKIFNLGT
DLTRPFEYLLATGNLSSKSGLGMLQNTGLCVVADKLNFIRYLSHFRCVHRGAAFAKMRTT
SVRKLLPESWGFLCPVHTPDGEPCGLMNHMTASCEIVAKSLPTVSLPALLCSLGVTPVDG
SPGQAFSDCYPVVMDGAVVGWVEAELAPAVADSLRRFKVLKEKKIPPWTEIVLVPKTGKA
SLYPGLFLFSTPCRMVRPVRNLALGKQELIGTFEQLYINVGILEDEIEPGVTTHQELFPH
SMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFMDRSDNKLYRLQTPQSPLVRP
YMYDHYNLDNYPSGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSIYKTELVDLADK
VKGDNSVVFGAKSDDLRVKEKLDADGLPHIGSTLQYGDPFYSYINLNTGQTFVTFYKSQE
ACVVDNIKICSNDTGSGRFKRVCITVRVPRNPTIGDKFASRHGQKGILSRLWPAEDMPFT
ESGMSPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLSHDATPFTFSEESSALEYFGEM
LRAGGYNYYGTERLYSGMSGQELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQP
VGGRNIQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCVDCGSLLSPLLEKPP
PSWSAMRHRKTVCTLCGKSDSIDSVSVPYVFRYFVAELAAMNIKVKLDVK
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggacttttcagagaagtggagtaatgtgcccaaagctccgagtctgaagaacctgaca
gagggaagcttcggcgccctgaaggagactcagcatgccgctgttcaggatctgactaaa
gctcacatcgagtcctttgaccacgctgtcactgaggggctcagccgggtggtgcagtcc
atccctgtgttggagttcacattcagaaaagacaggatcagccttgcgtttgtcgacgcc
gccctctgcagcccggtggtctccaaagggagcattagcagggagatgaaggtgtttcca
gcagagtgcagaggaagaaaatgttcatacaaaggaaaactggtggcagacgtcacctgg
tcagtcaatggtgttcccaaaggcacaatcaaacagaccttgggtcacctgccaatcatg
gtgaagtccaagctgtgtaacttgtatggcatgtcccccaaagagcttgtagaacaccat
gaagaagcagaggagatgggaggttatttcatcgtgaatggaaatgagaaggtcattcgt
atgctgatcatgccaaggaggaactatcctattgctatgtccaggccaaagtggaagagc
agggggcagggatacactcagtatggtatttccatgcgttgcgtgaaggacgagcactcc
gccatcaacatgaacctgcattatctggaaaacgggactgtgatgctgaacttcgtctac
caaaaagagctcttcttcctcccactaggctttgtgctcaaggccctggtggacttcaca
gacttccagatctaccaggagctaatcaaaggccgtgaggacaactccttctacaagagc
tgtgcgtcagagatgctgcgcattgtcatggaggagggctgcaccacccgcagcaaggtg
ctcaattacctcggagagcgcttcagggttaagttgaaccttcccgagtggtacacaaac
cagcaatgtgccaacttcctgctggacgagtgcatctgtattcacctgaagtcagacgtg
gagaagttctacctgctgtgtctgatgaccaggaagctgtttacgtacgcaaagcaggag
tgcatggaggaaaacccagacagcatcatgtgtcaggaagtgctcacacctggtcagctc
tacctcatgtttctgaaggagaaacttgctggctggttggtgtctgtgaagctgttattt
gaaaagaaatgccacagactgaacactgaaaacgtgatgaaaatatttaacctgggcact
gacctgaccagaccctttgaatatctgctggccactgggaacctcagctccaagtcaggt
cttggcatgctccagaacacaggcctgtgcgtggtagctgacaagctcaacttcatccgg
tacctgtcccacttccgctgtgtgcacagaggggcagcattcgccaagatgaggaccaca
tctgttcgtaagctgctgcccgaatcctggggattcctgtgtcccgtgcacactcctgat
ggagagccttgtggcctcatgaatcacatgacagccagctgtgagattgtggcgaagtct
ttgcctaccgtatctctgcctgctctgctatgctctcttggtgtgactccagtagatggc
tcccctggccaagctttttcagactgctaccctgtggtgatggatggggctgttgtaggt
tgggtggaggctgaattagccccagctgtggctgactcactgcgcaggtttaaggtgctc
aaagagaagaagatccctccctggactgagattgttctggttccaaaaacaggcaaggcc
agcttgtacccaggcctgttcctcttcagcacaccctgtcgtatggtgcggcctgtccga
aacttggctcttggcaagcaagagttgattggcacctttgaacaactttacatcaatgtg
ggcatcttggaggatgagatcgagccaggagtgaccacacaccaggagctcttcccgcac
agtatgctcagcgtggtggctaacttcatcccctactcagaccacaaccagagtcctagg
aacatgtaccagtgtcagatgggtaagcagactatgggtttccccctgcactcattcatg
gatcgctcagataacaagctgtaccggctccagacccctcagagcccgctggtcaggccc
tacatgtacgaccactataacctggacaactaccccagcggcaccaacgccatcgtggct
gttatatcctatacaggctacgacatggaagacgccatgattgtgaacaagtcatcatgg
gagagaggctttgcccatggaagtatctacaagactgagctggtagacctggcggataag
gtgaagggagacaacagtgtggtgtttggagccaagtcagatgacctgagagtaaaagag
aaactggacgccgatggactaccacacattggatcaacacttcagtatggagaccccttc
tacagctatatcaacctcaacactggtcagacctttgtcacgttctacaagagccaggag
gcctgtgttgttgacaatataaagatctgcagcaatgacaccggctcaggccgctttaaa
cgcgtctgcatcactgtacgagtgccgcgaaaccccaccatcggtgacaagtttgccagc
cgccacggtcagaagggcatcctgagccgcctgtggccggccgaggacatgccctttaca
gagagtggcatgagtcctgacatcctgttcaacccccacggcttcccctctcgcatgacc
atcgggatgctgattgaaagcatggcgggcaaatccggcgccctgcacggcctgagccac
gatgccacgcccttcaccttttcagaggagagctctgcgctcgagtactttggtgaaatg
ctccgggcaggtggctacaactactatggcacagagcggctttacagtgggatgagcggt
caggagctagaagccgacatcttcattggagttgtctactaccagcggctacgtcacatg
gtctctgacaagtttcaggtgaggaccacaggagcacgagacaaggtgaccaaccagcca
gtgggaggaaggaacatccagggaggaatccgttttggcgagatggaacgagacgccctg
ctggcccacggctcctctttcctgcttcacgaccgcctcttcaactgctcagaccggtcg
gtggctcaggtgtgcgttgactgtggcagcctgctctcccctctgttagagaaaccacca
ccatcctggtcagccatgcgtcaccgaaagactgtctgcactctgtgtggtaaaagtgac
tctattgactcggtgtctgttccttatgtcttccgctactttgtagccgagctcgcagcg
atgaacatcaaagtcaaattagatgtaaaatga
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