Larimichthys crocea (large yellow croaker): 104922294
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Entry
104922294 CDS
T04659
Name
(RefSeq) hemicentin-1-like
KO
K06499
carcinoembryonic antigen-related cell adhesion molecule
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lco03037
]
104922294
04147 Exosome [BR:
lco04147
]
104922294
04090 CD molecules [BR:
lco04090
]
104922294
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lco00537
]
104922294
Cilium and associated proteins [BR:
lco03037
]
Other cilia and associated proteins
Stereociliary proteins
104922294
Exosome [BR:
lco04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
104922294
Exosomal proteins of bladder cancer cells
104922294
CD molecules [BR:
lco04090
]
Proteins
104922294
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lco00537
]
Antigens
104922294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
Ig_5
V-set
Ig_4
Ig_6
C2-set_2
Receptor_2B4
V-set_CD47
Big_7
Motif
Other DBs
NCBI-GeneID:
104922294
NCBI-ProteinID:
XP_027143022
LinkDB
All DBs
Position
XIII:29556630..29568844
Genome browser
AA seq
1346 aa
AA seq
DB search
MEKKGEGTFSIILLALIQGILASGAVEVHPSINPAKVGDTVNLSLSPSVVMKSGNWAVGD
SVILSWVGDQQAVFPSHNGRASVNVVTGALTLSSVTVADSGVYVVQSTDPQLKANVSITV
LETVSNVTIRVSPQTNLMEFNGSAVLTCAVSSGSSLSFLWMNDSAVVTASDRVQLSDGNS
TLTILNVTRYDQGPFTCHAFNLVSNGTSDPVNFTITYGPDNMALTVNGQNTTSFSPGSNL
TMLCSAQSNPPAVLQWVVRGALVNTTGPLLELISVSKEQSGPYSCLAFNNHTNMNSSITT
NIVIGDLSSGSEQQELRFPTKKKLKSEMEPPVMFVLILAMMTLAPAYSQSIYASENPLPV
GSNVTLFSQTSVTLGAWMFNDIIVMITPTVNIITDAWRNRVTFNSTTSSLTIRSVQVEDS
GLYTLQALNSFTARLRLSVQDPVSNVTLRANATSLVEYNDTAVLMCSVSNGSSLTYVWLN
DSSVVTDGVGVQLSDEGATLTLIGVTRYDEGPFRCNVSNGISHETSLPVHLNISFGPSNT
SMVIMPMKHIYSTGSNITLSCSAESSPPAMIQWMVNGVYLNEFTQQLKLEMVTESNSGNY
KCLFRNTVTSRFTSTSAMIRILGPIAAVVVNHTGGPAEVHYPFTLRCEVTGTVVYIKWWK
NGQLISTDNTTTFSMDNKTLNLNPVQHSDNGDYQCQAFNYVSNMTSRPYTVQVNYGPMTP
VITGPSMALTGTQQILNCSSDSHPPSHISWYFNDTLLATTSQLALGPLTLNMSGKYICMA
VNNVTGKNSSAYTMLTVLDPVTTASIKIVGAQPILNHTFTLTCETGGGVELISWMYNWSS
LYANDTRNLSMDNTVLTFDPVMFSDNGPYQCVASNPLSHVASNIFMLDVFYGPKMPMITG
PKMAKAGDNVTLSCSASSNPLSVYKWFFNDSLVANTSEYVTPPLTMSMSGMYTCVAFNNI
TGKNSTAYTMLAVDPIVDAQIVAPMIPAIEGQFYNLTCNVTGPAEHVYWMKNSEPLQEDN
TTAFYMDNRTVTFNPLQRNNTGSYECTAINTVWKMSSPPHELIVNFGPLTPVIDGPAFAE
TGRTAVFSCSAMSMPPSQFSWWFNGSEVANTSVFTTDPLSVNMSGEYACMAYNYLTGMNS
TSSKMLTIIEAIESVMISNSTIPINNENLTLTCEITGPYEEMYWMKDDGMFYHAGNITLN
FIPVTTDDDGTYQCFASNKAGLHPSPKYILRVNYGPLSVNISGSDSAKVGVPVTMTCSAE
SQPDCDFNWFHNYQSSPVMAGSVLTFLATKEKEGKYTCMARNPVTNITMYATTAFALDHA
SALHIPSQAGLMLMGLFALSVTVLFN
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaaggtgaaggaaccttttccattatactgctggctttaatacaaggtatt
ctggcctctggtgctgtggaggtccatccctccatcaacccagctaaagttggggacact
gtgaatctgtctctgtctccttcagtggttatgaaaagtggaaactgggcagtaggagat
tctgtcatcctcagctgggtgggggaccagcaggcagttttccccagtcacaacggcagg
gcatcagtcaacgtcgtcactggagctctcactctgagctccgtcactgtggctgactca
ggagtctacgtagtgcagagcactgacccccagcttaaggctaatgtttccatcactgtt
ctggagaccgtttcaaatgtgacgataagggtgagtccacaaacaaacctgatggagttc
aacggttcagcagtcctcacgtgtgctgtctcctctggatcctctctctctttcctgtgg
atgaacgacagtgctgtggttacagccagtgacagagttcagctcagtgatggaaactcc
actctcactatactcaatgtgactcgctatgaccaagggccattcacatgtcacgcgttc
aaccttgtcagtaatggcaccagtgatccagtcaactttactatcacctatggtccagat
aacatggccctaacagtgaatggacagaacacgacctccttttcacctggatccaatctg
actatgctctgttcagcacagtccaatcctccagctgtgcttcagtgggttgtcagagga
gcgcttgtgaacactacaggtccattgttggagctgatcagtgtgagcaaggagcaaagt
ggtccatactcctgtctggcctttaacaatcacaccaacatgaacagcagtatcaccaca
aacatcgtgataggagacttgtcatcgggatctgaacaacaggaactgaggtttccaacc
aaaaagaagctgaagagtgaaatggagcctccagtgatgtttgtccttattctggccatg
atgaccttagctccggcatatagccagagtatatatgcctctgagaaccctttaccagtg
ggcagcaacgtcacacttttcagccagaccagcgtcactttaggagcatggatgtttaac
gatatcattgtgatgataacaccaacagttaatatcataactgacgcttggagaaacagg
gttacattcaattcaaccacttcatcgctgactataagatcagtgcaggtggaagactct
ggattatacactttacaggctttgaattctttcactgctcggttaagattgtcagtccaa
gatcctgtttcaaatgtgactctgagggcaaatgcaaccagccttgtggagtacaatgac
acagcagttctcatgtgctctgtgtccaatgggtcgtccctgacttatgtttggctgaat
gacagctctgtagtcacagacggtgtgggagtacagctcagcgatgaaggcgccaccctc
accttgattggagtaacccgctatgatgaggggccgttcaggtgcaatgtgtccaacggg
atcagccatgaaaccagtctacctgtacatctgaacataagctttggtccgagtaacaca
tcaatggtgatcatgcctatgaagcacatctacagtacgggatcaaacatcacactgtca
tgctcagcggagtccagccctccagcgatgatccagtggatggttaatggggtttaccta
aatgagtttacccaacagcttaaactggagatggttacagagagcaactcagggaattat
aaatgcttattccgcaacacagtcacatccaggttcaccagcacaagtgcaatgatcagg
attttggggcctatcgcagcagttgtggtgaatcatacaggtggaccagcagaagtccat
tatccgttcacgctgcgttgtgaagtaactggaactgttgtctacattaagtggtggaag
aatggtcaacttatttccactgacaatacaacaacgttttccatggacaacaagaccttg
aatcttaacccagtccaacattcagataatggagattatcagtgtcaggcttttaactat
gtaagcaatatgacaagccgcccttacacagttcaagtaaattatggcccaatgacaccg
gtgatcacggggccgtccatggctctgacaggaacacagcagatcctgaactgctcaagc
gactctcatcctcccagccacatcagctggtacttcaatgacaccctgttggctaccacc
tcacagttagcgcttggacctctaaccttaaatatgagtgggaaatacatctgcatggct
gtcaacaatgtaaccggaaaaaacagctctgcctacacgatgctcactgttttagatcca
gtgaccacggcatccataaaaattgttggagctcagccaatcctgaaccacactttcact
cttacctgtgagacaggtggaggggtcgagttaattagctggatgtataattggtccagc
ctgtatgccaacgatacaagaaacctctcaatggacaacactgtcctcacctttgatcct
gtcatgttctctgataatgggccctatcagtgtgtagcgtccaacccactcagccatgtg
gccagtaacatcttcatgctggatgttttttatggacccaagatgccaatgatcacaggt
ccaaaaatggcaaaggcaggcgacaacgtcacactcagctgctccgcatcatcaaaccct
ctcagtgtctacaaatggttcttcaatgattctcttgtggcaaatacgtctgagtatgtt
acacctcctcttacaatgagcatgagtgggatgtacacctgtgtggccttcaacaacatc
accggcaaaaacagcactgcgtacacaatgctcgctgttgatccgatagtggatgcacaa
atagtagcaccaatgattcctgccatagaaggtcagttttataacctaacatgcaatgtg
actggacctgctgagcatgtttactggatgaaaaacagtgagccactgcaagaagacaat
acaactgctttctacatggataacaggacagtcaccttcaacccactacaacgcaataat
actggcagctacgagtgtacggctattaatactgtttggaagatgagcagccctcctcat
gagctcattgtgaactttggaccattaacaccggtcattgacgggccagcttttgcggag
acaggacggactgcagtcttcagctgttctgctatgtcgatgcctcccagtcagttcagc
tggtggttcaatggctccgaggtggccaatacttcagtgttcacaactgaccctttgtct
gttaatatgagtggagaatacgcctgtatggcctacaattatttgacagggatgaacagc
acaagctctaagatgctcacaattattgaggcaatagagtcagtgatgatcagcaacagc
accattccaataaacaatgagaacttaactctaacttgtgaaatcactgggccctatgag
gagatgtactggatgaaggacgatggcatgttctaccacgctggaaatatcactctgaac
ttcattccagtgactacagacgatgacgggacatatcagtgtttcgcctctaataaagct
ggtctacatccaagccctaaatacattctccgagtgaactatggccctctgagtgtgaat
atcagtggttcagattcagctaaagttggtgtccccgtgacgatgacatgctctgctgaa
tctcagccagactgtgactttaactggttccataactatcagtcatcacctgtaatggct
ggctctgttttaactttccttgcgacaaaagagaaagaggggaaatacacatgtatggcg
aggaaccccgtgaccaatatcacaatgtatgcgactacagcctttgctctcgatcacgcc
tccgccctccacatcccatcccaagctggtctgatgttgatgggtctgtttgctttgtcc
gtcactgtacttttcaattga
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integrated database retrieval system
