Larimichthys crocea (large yellow croaker): 104924495
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Entry
104924495 CDS
T04659
Symbol
notch1
Name
(RefSeq) neurogenic locus notch homolog protein 1 isoform X1
KO
K02599
Notch 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104924495 (notch1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_4
Ank_3
Ank_5
EGF_3
cEGF
JAG1-like_EGF2
DL-JAG_EGF-like
Motif
Other DBs
NCBI-GeneID:
104924495
NCBI-ProteinID:
XP_010736162
LinkDB
All DBs
Position
IX:complement(2532886..2555414)
Genome browser
AA seq
2479 aa
AA seq
DB search
MYRFFVKLTFLIPAIVISQGLKCSLPTESCLNGGRCEATSNGNGECKCPSDYVGNRCQFP
SPCSPSPCRNGGECRAVSHGNTFDFRCVCRLGFTDRLCLTPTNHACMSSPCRNGGTCDLI
TLTAYHCRCPPGWSGKSCQIANPCASNPCANGGQCSAFDSTYICTCPPSFHGQTCKQDVN
ECAQTPSPCLNGGICVNEVGSYHCRCPQEYTGQHCETPYMPCSPSPCHNGGTCVQKGDTI
YDCSCLPGFTGQHCEHNIDDCPGHSCQNGGVCVDGVNTYNCQCPPHYTGQYCTENVDECE
LMPNACQNGGTCHDTHGSYHCVCVNGWTGDDCSENIDDCASAACYHGATCHDRVASFFCE
CPHGRTGLLCHLDDACISNPCQKGSNCDTNPVNGKAICTCPPGYTGSACNLDIDECSLGA
NPCEHGGRCLNTKGSFQCRCLQGYEGPRCEMDVNECMSNPCHNDATCLDQIGGFHCICMP
GYEGVFCNINTDECASQPCLNNGKCVDKINSFHCECPKGFSGNLCQVDIDECASTPCKNG
AKCTDGPNKYTCECAEGYSGQHCETDINECYSDPCHYGTCKDGLASFTCYCRPGYTGRLC
ETNINECLSQPCKNGGTCQDRENTYICACPKGTAGFNCEVNLDDCKSKPCDYGRCIDKIN
GYECACEPGYTGAMCNINIDECAINPCHNGGTCVDGTNSFTCLCPEGYNDATCLSQVDEC
GSNPCIHGRCQDLINGYKCTCDSGWSGPNCDINNNECESNPCMNGGTCKDMTSGYHCTCR
AGFTGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGDNCEILLAPCSPRPCKN
GGVCKEAEDYQSFSCICPEGWQGQTCEIDINECVKSPCRNGAICHNTMGGYQCKCQPGYT
GQKCETDTDDCKPNPCSNGGLCRDGINSFTCTCLPGFRGGRCEQDINECESNPCRNGANC
TDCVNSYTCTCPPGFSGINCEINTNDCTDSSCFNGGTCVDGINAFTCLCLPGFTGSYCQY
DINECDSKPCLNGGSCLDSYGTYKCTCPHGYTGVNCQNLVRWCDSSPCKNGGTCWQQGAS
YTCQCQTGWTGLYCDIPSVSCEVAAKQQGVEVAHLCRNSGQCLDAGNTHYCRCQAGYTGS
YCQEQVDECSPNPCQNGAVCTDYLGGYSCECVPGYHGVNCSKEINECQSQPCQNGGTCID
LINTYKCSCPRGTQGVHCEINLDDCTPSTDPLTNEPKCFNNGKCVDRIGGYHCLCPAGYV
GERCEGDVNECLSDPCDPRGSYNCIQLTNSYRCECRTGYTGQRCDKVFDGCKGRPCRNGG
TCAVASNTPHGFICKCPPGFTGSSCEYDSRSCGSLNCRNGGTCVSGHLGPRCLCPSTFTG
PECQTPTDSLCISNPCYNGGTCQITPDAPFFQCSCPSNFNGLLCHILDYSFVGGFGRDIT
PPPEVEVSCEIPQCDEWAGNHICDSLCNNHACGWDGGDCSLNFDDPWQNCSAALQCWRYF
NDGKCDGQCNSPGCLYDGFDCQGQEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLD
CANNMPEKLADGHLVLVVHIPPEQLKNHSSSFLRDLSSVLHTNVVFRRDAKGEPMIFPYY
GNEQDLVKHNVLKRSADGWPEWASVPANVLGQVKESVSAMVSPRKRRELEPVQVKGSVVY
LEIDNRQCYQQSTECFQSATDVAAFLGALASSGNLNVPYIEAVTSVRPTPSSSELYPMYV
VFLGLAALGFICLGVLVSRKRRREHGQLWFPEGFKVSEPSKKKRREPLGEDSVGLKPMKN
SDINLMDDNQNEWDDEDPDCRRFRFEEQAMLDLSDHTDHRKWTQQHLDAADLRIASIAPT
PPQGEIENDCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDPSAEIISDFIYQGANL
HNQTDRTGETALHLAARYARSDAAKRLLESSADANVQDNMGRTPLHAAVAADAQGVFQIL
IRNRATDLDARMHDGTTPLILAARLAVDGMVEELINCHADANATDDSGKSALHWAAAVNN
VEAAMVLLKNGANKDMQDNKEETPLFLAAREGSFETAKVLLEHFANREITDHLDQLPRDI
AQERMHHDIVRLLDEYNVVRSPGLHSAPLSTSSLSPPLCSPNDYLSNLKPTLSVKKVRKL
SSGGKGGKDGGKDNRMKKKKSLDGKGNLLDTSAVLSPVDSLESPHGYLSDVASPPMTSPF
QQSPPMSLNHLQGNGDHMGQMSMGKDMGCMSFDPNPPRLSHLPVSSPNSQGTTSIGGSRG
GQCDWITRMHPGVGQQGGFTQAPPMSHNMMGALHGVSTATLSQIMGYQNLQTSHLGSSAH
MMQQAHSRQLQHQNSNSTTAGQTLNQSFPNIELNGSDMQQNNGSGRSMPIHTVMPQETQI
LGTQFLTPPSQHSYSGPMDNTPNHQLQVPDHPFLTPSPGSPDQWSSSSPHSNMSDWSEGI
SSPPTSIHSQMNLIPDQFK
NT seq
7440 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtttctttgtgaaactaacatttctgattcctgcaatcgtcatctcacaaggt
ctaaaatgctccctacccactgaatcgtgcctgaatggaggaaggtgtgaagccacctcc
aatggaaatggagagtgcaagtgtcccagtgactacgtaggcaatcggtgccagtttcca
agcccctgcagcccctcgccgtgccgcaacggcggagaatgccgagctgtctcccatggc
aacacgtttgatttccgctgcgtgtgccgcctgggtttcaccgaccgcctatgcctgacc
cccaccaaccacgcctgcatgagctctccctgtcgcaatggaggaacgtgtgatctgatt
accctcaccgcctaccactgccgctgcccacctgggtggtcaggcaaatcctgccaaatt
gccaacccatgtgcttccaatccatgtgcaaacggtggccagtgctcggcattcgattcc
acctacatctgcacctgcccgcccagcttccacggccagacctgcaagcaagacgttaac
gagtgcgcccagacgccctctccatgtcttaacggcggcatttgcgtgaacgaggtgggc
tcgtaccactgccgctgccctcaagagtacaccggccaacactgcgagaccccctatatg
ccatgcagcccctcgccgtgccacaacggaggcacctgtgtccagaagggagacaccatc
tatgactgtagctgcctgccaggcttcactggtcagcactgtgagcataacatcgacgac
tgcccgggtcacagctgccagaacggtggagtgtgtgtggatggtgtgaacacctacaac
tgccagtgcccgcctcactacacaggtcaatactgcactgaaaatgtcgacgagtgtgag
ttgatgcccaacgcatgccagaatggaggaacgtgccacgacacccacggcagctatcac
tgcgtctgcgtcaacgggtggacgggtgacgactgcagcgagaacatcgacgactgcgcc
agcgccgcttgttaccacggtgctacctgccacgaccgcgtagcctctttcttctgcgag
tgtcctcacgggcgcacaggtttgctgtgccacctcgatgacgcctgcatcagcaaccca
tgtcaaaaaggatccaactgtgacaccaatccggtcaatggcaaggcaatctgcacctgt
cccccaggttacaccgggtcagcctgcaacctggacattgacgagtgctccctcggtgcc
aacccttgtgaacacggtggccgctgcctcaacaccaaaggctctttccagtgtaggtgt
ctccaaggatacgaaggacctcgttgtgagatggacgtcaatgaatgcatgtctaatcct
tgccataatgatgccacctgcctggatcagattggaggtttccactgcatctgtatgcca
ggatacgaaggcgtgttctgcaacatcaacacagatgaatgcgccagccagccttgcctt
aacaacggcaagtgcgtcgacaagatcaactccttccactgcgagtgccccaaaggtttt
tcggggaatctgtgtcaggtggacattgatgagtgtgccagcaccccctgcaagaatgga
gctaagtgcacggacggtcccaacaagtatacctgcgaatgtgctgaaggttactcgggg
cagcactgcgaaactgacatcaatgagtgctactccgacccctgtcactatggcacctgt
aaggacggcctggcctccttcacctgctactgccgccccggctacactggccgcctgtgc
gaaacaaacatcaacgagtgtctgagccagccctgcaagaatggaggcacctgtcaggac
agggagaacacgtatatttgtgcctgccccaaaggcactgcaggtttcaattgcgaggtc
aacctggacgactgtaagagcaaaccctgcgactacgggaggtgcattgacaaaatcaac
ggctacgagtgtgcatgcgagccgggctatacaggagcgatgtgcaacatcaacatcgac
gagtgtgccatcaacccctgccacaacgggggaacgtgcgtcgatggcacaaacagcttc
acctgcctgtgtccagagggctacaacgacgccacctgtttgtcccaggtggatgagtgt
ggcagcaacccctgcatccacggccgatgccaggacctcatcaatggttacaaatgtacc
tgcgactctggctggagcggcccaaactgtgacatcaataacaacgagtgtgagtccaac
ccgtgcatgaacggaggaacctgcaaggacatgaccagcggataccactgcacatgcaga
gccggcttcactggacctaactgccaaactaacatcaacgaatgcgcctccaacccctgc
ctcaaccagggcacctgcatcgacgatgtggctggatacaagtgcaactgtttgctgccc
tacactggtgacaactgtgagatcctgctggctccctgcagccccagaccctgtaaaaac
ggtggagtatgtaaggaggctgaggactaccagagcttctcctgcatctgccctgaagga
tggcaaggtcaaacatgcgaaattgacatcaacgagtgcgtgaagagtccgtgccgcaac
ggtgccatttgccataacactatgggtggctaccagtgcaaatgccaaccaggctacacc
ggtcagaagtgtgagacagacaccgatgactgcaaaccaaatccctgcagtaacggtggc
ctgtgccgcgatggcatcaacagtttcacgtgtacctgtctgcccgggtttcgtggcggt
agatgtgagcaggacataaatgagtgtgagagtaacccctgtaggaatggcgccaactgc
accgattgtgtcaacagctacacctgcacctgcccgcctggcttcagtggcataaactgt
gagatcaacaccaacgactgcactgacagctcttgcttcaacggtggcacctgtgtggac
gggattaatgcattcacctgcttgtgtctgcctggattcactggcagctactgccaatat
gatatcaacgagtgtgactccaaaccgtgcctcaatggaggctcttgtctggacagttat
gggacgtacaagtgcacctgtcctcacggctacacaggagtcaattgtcagaatcttgtg
cgctggtgtgattcatccccctgtaaaaatggaggcacttgctggcagcagggagcttct
tacacctgccaatgtcagactggatggaccggtctttactgtgatatccccagcgtgtct
tgcgaggtcgcagccaaacaacaaggggtggaggtggctcacctgtgcagaaactcaggc
cagtgtctggacgccggaaacacacattactgccgctgccaggccggctacactgggagt
tactgccaggagcaagtagacgaatgctcacccaatccttgccagaatggagccgtctgc
actgactatctgggtggctacagttgtgagtgtgtccctggttatcacggtgtaaactgc
tccaaagagatcaacgaatgtcagtcacagccctgtcaaaatggaggcacttgcatcgac
ctcatcaacacatacaagtgctcctgtcccagaggaacgcaaggtgtccactgtgagatt
aatctggatgactgcaccccctccaccgacccactgaccaacgagcccaaatgcttcaac
aatggcaagtgcgtcgaccgcatcggaggttaccactgtctgtgcccggctggctacgta
ggcgagcgttgcgagggcgacgtcaacgagtgtttgtcggacccctgcgaccccagaggc
tcctacaactgcattcagctcaccaacagctaccgctgtgaatgccgcacaggatataca
ggtcagcgttgtgacaaggtgtttgatggctgtaaaggaaggccctgcaggaacggagga
acatgtgctgttgccagtaacacgcctcatggtttcatctgcaaatgtccacctggtttt
actggctcttcttgcgaatacgattctcgctcctgtgggagtctgaactgcaggaacgga
ggtacatgtgtgtccggccatctaggcccacgctgcctctgtccatcaaccttcactggg
cctgagtgccagacccccaccgacagcctctgcatctccaacccctgctacaacggtggc
acctgccagatcaccccggatgcgcctttcttccagtgcagctgtcccagcaatttcaac
ggcctgctgtgccacatactggattactcctttgtaggaggttttggccgggacatcacc
ccacctccggaagtggaggtgagctgcgagattcctcagtgtgacgagtgggcagggaac
catatctgcgactcgctgtgcaacaaccatgcctgcggctgggacggaggagactgctcg
cttaatttcgatgatccttggcaaaactgctccgcggccctgcagtgctggcgctacttc
aacgatgggaagtgtgacggccagtgcaacagccctgggtgtctctatgatggctttgat
tgtcagggacaggaaggacagtgcaacccgctgtatgaccagtactgtaaagaccactat
gctgacggtcactgcgaccagggctgcaataacgcagaatgcgaatgggacggcctggac
tgtgccaacaacatgcccgaaaagctggcagacggtcacttggtcctggtggtccacatt
cccccagaacagcttaaaaatcattcttcatctttcctccgagacctcagcagcgttctc
cacaccaacgtggtgttccgccgcgacgccaaaggagaaccgatgatcttcccgtactat
ggcaacgaacaggacctcgttaaacataacgtgctgaagcgctccgcggacggttggcct
gagtgggcttcggtgccggccaacgttttgggtcaagtgaaggagagcgtgtccgccatg
gtcagcccgcgcaaacgcagagagctggaacccgtgcaagtcaaagggtctgtggtttac
ctggagattgacaaccgtcagtgttaccagcagtctactgaatgcttccagagcgccaca
gatgtagcggccttccttggagcactggcctccagcgggaatctcaacgttccttacatt
gaagctgtcactagtgtgagacctactccctccagttcagagctctaccccatgtatgtc
gtcttcctgggcttggctgctttgggtttcatctgcctcggtgtcctggtgtcccgtaag
cggcgccgagagcacggccagctctggtttcctgagggattcaaagtgtcggagccaagc
aaaaagaagcgcagagagccgttgggagaagattctgttgggctgaagcctatgaagaac
tctgacataaatctcatggatgacaatcaaaatgaatgggatgacgaagatccagactgc
aggcgcttcaggttcgaagagcaggccatgctggatttgagtgaccatactgaccacagg
aaatggacacagcagcatctggatgcagctgacctgcgtatcgcatccattgctcctacc
cctcctcagggggagatagagaatgactgcatggatgtcaatgtcagaggaccagatggt
ttcactcccctcatgattgcctcctgcagcggtggaggactggagaccggtaacagtgaa
gaggaagaggatccctcagcggaaatcatctccgacttcatttaccagggcgccaacctc
cacaaccagactgaccgcacaggcgagacggccctccacctggccgctcggtacgcccgc
tctgatgctgccaaacgcctcctggagtccagcgccgatgccaacgttcaggacaacatg
ggacgcactccgcttcacgctgccgttgctgcagatgcgcagggagtgttccagatttta
atccgaaaccgtgccactgatcttgacgcccgcatgcatgacggaacaacgcccctgatt
ctggccgcccgattggcagttgatggcatggtggaagagcttatcaactgccacgccgat
gccaacgccacagacgattctggtaaatctgctcttcactgggccgcggctgtaaacaac
gttgaggctgccatggtgctgctgaaaaatggtgccaacaaggacatgcaagacaacaag
gaggagacgccgctcttcctcgcagcccgcgaaggcagcttcgagacagccaaagttctt
cttgagcattttgccaatcgtgagatcaccgaccatcttgaccagctgcccagggacatc
gcccaggaacgcatgcaccatgacatcgttcgccttctggatgagtacaacgtggttagg
agtcccgggcttcacagcgccccgctgagcacctccagcctctcaccacctctctgctcc
cccaatgactaccttagcaacctcaagcccaccctgtctgtcaagaaggttcgcaaactc
agctccggtgggaaaggagggaaggatggaggcaaagataatcggatgaagaagaaaaag
tcgctggatgggaagggtaacttgctagacacctcagctgttctctccccggttgattcc
ctcgagtcacctcacggctatctatccgatgtggcctctcctcccatgacatcacccttc
cagcagtctccacctatgtctttaaatcacctacaaggcaatggagaccatatgggtcag
atgagcatgggtaaggatatgggttgtatgtcttttgaccctaacccacctcgtctgtcc
cacctacctgtttccagccccaacagtcaaggtacaacatccataggtggcagcagagga
ggccagtgtgactggatcaccaggatgcacccaggtgtaggccagcaaggaggcttcacc
caggcgccacccatgtcccacaacatgatgggtgctctgcatggtgtcagcactgccacc
ttgtctcagatcatgggctaccagaatctgcagaccagccacttaggctcgtccgcacac
atgatgcagcaggctcactcgcggcagctccagcatcagaactccaactccaccacagcc
ggtcagaccctcaaccagagcttcccaaacatcgagctgaacggctccgacatgcagcaa
aataacggctcgggccgctctatgcctatccacaccgtaatgccccaggagacgcaaatc
ctcggcacacaattcctcacgcctccctcccagcacagctactctggccccatggacaac
acacctaaccaccagctacaggtgcccgaccatccgtttctaacaccctcccccggctcc
cctgaccaatggtccagctcgtccccacattccaacatgtccgattggtcagaaggcatc
tccagcccgcctacaagtatccattcacagatgaatctgatcccagaccagtttaagtag
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integrated database retrieval system
