Larimichthys crocea (large yellow croaker): 104931248
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Entry
104931248 CDS
T04659
Name
(RefSeq) laminin subunit beta-2
KO
K06243
laminin, beta 2
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04510
Focal adhesion
lco04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104931248
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104931248
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
Tropomyosin
F5_F8_type_C
Alanine_zipper
EzrA
Motif
Other DBs
NCBI-GeneID:
104931248
NCBI-ProteinID:
XP_019108782
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All DBs
Position
XV:complement(5217836..5270891)
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AA seq
1840 aa
AA seq
DB search
MPTMAMYLSLLMLAVSVFGQELPSGPHGCTEGSCYPATGNLLIGRAVNLSATSTCGLNEP
EHYCIVSHLQESDKCFECNSQHHYDPYRHRNSHRIENVIYLMDRNGDNTWWQSVNGEENV
SIQLNLEAEFHFTHLILKFKTFRPAAMMIERSADFGRTWRPYRYFASNCTKTFPSIPANR
LHHINDIICEERYSDIEPSTNGEVIYKVLDPAIHVKDPYSLDIQELLRITNLRINFTKLN
TLGDDLLDRRFDVLQKYYYAIYELVVRGSCFCYGHASECAPVPGVNTRESGMIHGRCVCK
HNTEGLNCEHCKDFHHDLPWRPAEVENPHTCRECNCNGHSSQCHFDMAVYLATGNASGGV
CDDCQHNTMGRNCEMCKPFYYADPVRDIRDPQACVACDCDPVGSMEGGVCDSHTDLDMRM
IAGQCRCKANVKGMRCDDCKEGYYGLSQNDPLGCQPCNCDPRGIIMMGAPCDQISGDCSC
KRHVTGRYCNECLPEYWGLSNDLVGCRPCDCDFGGAYNNRCMMGNGQCDCRMHLIGRQCS
EVQPGYFCAPLDYYKYEAEDATGHSPSDSALPGKVRPQAETDCVQHLSNQLRRNRRHRRI
TNSQQHRAALRRIRQLQQTPDVRTVHREHTPSHMVSWTGPGFARVKDGAGLVFTIDNIPY
AMEYDIMIRYEPESTEDWEALVSITSVMLPSSLRCGNLLPTEQLYRVTLPHRNRYIQMPR
PFCFEPSNRYVVAIRFQRHGVSHRHLTAFILVDSLVLIPKYTELPGFHGNEPEAEQRRDE
MTRYMCLDSFMMTPMPALAEMCSKLICSISSIIHDGALSCQCDPQGSQSGECDKVGGQCL
CKPNVMGRRCDQCAPGTYGFGGTNGCTACDCHPEGSLSHQCDPVRGQCQCKQGATGRQCS
DCQPGQWGFPSCSPCQCNGHADLCDPHTGECRDCRDYTTGHFCERCVDGFFGNPVLGSGE
HCRPCPCPSNPGSNHFNGLSCQEDHTSNQIICNCKEGFAGSRCDKCSPGYYGNPEQPGGQ
CLPCECHGNIDAQDPESCDPRTGECLKCLHHTDGPSCAECQHGYYGNALAKNCRRCTCVT
AGTIHSACSDGQCHCDRQTGACACRENVTGHNCDQCAPNHWNYGQDGGCEPCGCNLEHAM
GTHCNMFTGQCHCHHGFGGKQCTECEQFHWGDPRVRCQECNCHPLGSEMAQCDRMTGACE
CREGAAGRRCDECARGFTGDFPKCVQCHPCFQLWDDAVCQIKRDLEHIQYTVDKIQENGL
TPVVGDTRIKELEKKLKKVKDLIKAEDNERIHQLIGQSIDDLRAEIALTDGRLMAVTREL
NTTAAEEEAMKRILSDLERELRDLNTTVARKQQLLTEYLHSGFADQFEKIKEYYKQSVAA
EDKCNFTVSSPLGPVEQSKETRARTEDLLDVNKDNFLRAVAAQNKSLSELQQRAHDLDKK
VHRLSHKVCGGHTNASANGTCSDSKCGGAGCRDDQGNRICGGEGCSGTASAAMTAQNLAN
NVTDSLKAANEDLKNVARKLQDIASLTQDVKNQAMTTLEKAQKKKDNFEKNNKKLKDFIK
EIKDFLTEEGADPESIEKVAQQVLSITLPVNKTTMDNMIMQIKDSISNLTNVEDVINQTS
QHIMKAKELLDEAKDAKTRAEGVKDKADNTKQALNVSEMAIEKAQTALDEAQKNLNSTRN
ATAEVDERLTQLEDKQMDVMMRLQNLSLGVEALRNKTEQNRQMAEDAKARADNATQLASS
LEPSLNNTEERYRELQTKMGSVDGGLEGINQKAKDMKKEAEDLLNEAKKGIEQLKKLEKK
FRNNEQKMQKQRMELDELKENATMVRDEIREQVQKYSSCV
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccatggcaatgtatctgagccttctcatgctggctgtcagtgtgtttggacag
gagctcccatcaggccctcatggctgcaccgagggcagctgttaccccgcgacaggaaat
cttctgattggacgagctgtcaacctatccgccacctctacttgtggcctgaacgaaccg
gagcactactgtattgtcagccacctgcaggagtcagacaagtgtttcgagtgcaactcc
cagcatcactacgacccgtaccgccacagaaacagccaccgcattgaaaacgtgatctac
ctcatggaccgcaacggagacaacacctggtggcagtctgtcaacggagaggagaatgtc
agtatccaactgaacctggaggccgaattccacttcacacatctcatcttgaagttcaag
actttccgacctgcagccatgatgatcgagcgttcggctgatttcggccgcacttggcgc
ccgtaccgctactttgcttcaaactgtaccaaaacctttcccagcatccctgccaacagg
ctgcaccacatcaacgacatcatctgcgaggaacgctactccgacatcgagccctccact
aatggagaggtcatttataaagttttggaccccgctattcatgtgaaagacccctacagc
ttggacattcaagaacttctgcgcatcaccaacctgcgcatcaacttcaccaagctcaac
actcttggagacgacctactggaccgacgcttcgatgtccttcagaaatattactacgcc
atctacgagctggtggtcagagggagctgcttctgttacggacacgcctcagagtgtgcc
ccggtgccgggggtcaacacccgggagagcggcatgatccacggtcgctgtgtgtgcaaa
cataatacagagggcctgaactgtgagcactgcaaagatttccaccatgacctgccatgg
agaccggcagaggtggagaacccacacacctgcagagagtgtaactgtaacggccactca
agccaatgtcactttgacatggcggtgtatttggccacgggcaatgccagcggaggagtg
tgtgatgactgccagcacaacaccatgggacgtaactgtgagatgtgtaaacctttctac
tacgcagaccccgttagggacattagagaccctcaggcgtgtgtcgcctgtgactgtgac
ccggtcggatcaatggagggaggagtgtgcgacagtcacacagatctggacatgaggatg
attgctggacaatgtcgctgcaaagccaacgtcaaaggcatgcgctgcgacgactgcaag
gaaggttactacggactgagccagaacgacccgctggggtgtcagccctgcaactgtgac
cctcgtggcatcatcatgatgggcgctccttgtgaccagatcagtggggactgctcctgc
aaaagacacgtcactggtcgctactgcaacgagtgtctgcctgaatactggggcctcagt
aatgacctggtgggctgcagaccatgtgactgtgacttcggtggagcctacaacaacagg
tgcatgatggggaacggccagtgtgactgcaggatgcatcttataggtcgacagtgttca
gaggttcagcctgggtatttctgtgccccgctggattactacaaatacgaggccgaagat
gccactggacactcccccagtgactctgcactgccgggcaaagttcgtcctcaggcagag
accgactgtgtccagcacctgagtaaccagctgagaaggaaccggcgccaccgtcgcatt
accaattcgcagcaacatcgggcggcattgagacgcatccgccagctgcaacaaacaccg
gacgtgaggacggttcatagagagcacactcccagccacatggtgtcgtggacaggtcct
ggttttgcccgtgtcaaagatggtgctggcctggtgttcactatcgacaacatcccctac
gccatggagtatgacatcatgatccgctacgaacctgagtccacagaggactgggaggct
ttagttagtatcacatctgtaatgctgccctccagtctccgctgtggaaacctcctccca
actgaacagctctacagagtcaccctgccacaccgtaacagatacatccagatgcccagg
cctttctgttttgagcccagtaatcgctatgtggttgcaatcaggttccagcgccacggg
gtgtcacacagacatcttactgccttcattctcgtcgactcactggttctgatcccgaaa
tacactgagcttcctggtttccatggtaacgagcctgaggcagagcagcggcgggatgag
atgacccgctacatgtgcctggattccttcatgatgacaccgatgcccgccctggctgag
atgtgctccaaactcatctgcagtatttcatccatcatacatgatggtgctctgtcctgt
cagtgcgaccctcagggctcccagagtggcgagtgtgataaggtgggaggtcagtgcctt
tgcaaacccaacgtgatgggtcggcgctgtgaccagtgtgccccgggaacctacggcttt
ggagggacaaatggctgtactgcttgtgactgccacccagagggctcattaagccaccag
tgcgacccagttagaggccagtgccagtgcaagcagggagccaccgggcggcagtgctca
gactgccaaccaggccagtggggcttccccagctgcagcccctgtcagtgcaacggccac
gcagacctctgtgacccccacaccggggagtgtagagactgcagggactacacaacagga
cacttctgtgagcgctgtgtggatgggttctttggaaacccggtgcttggttcaggggaa
cactgtcggccctgcccctgccccagtaaccccggctcaaatcactttaacggcctctcc
tgtcaggaggaccacacctccaaccagatcatctgtaactgcaaggaaggctttgctggg
tcccgctgtgacaagtgttcccctggttactatggcaacccagagcaaccaggcggacag
tgcctgccgtgcgagtgccacggcaacatcgacgcccaggatcctgagtcatgtgacccc
aggacaggtgaatgcctcaagtgcttgcaccacaccgatggcccgtcctgtgccgaatgt
caacatggttactatggcaacgccttggccaaaaactgcagacgctgtacctgtgtgact
gctgggaccatccactcggcctgcagcgacggacagtgtcactgtgacaggcagaccgga
gcctgcgcttgtagggagaatgtgaccggccacaattgtgaccagtgtgctccgaaccac
tggaactacggtcaggatggaggctgcgagccgtgtggctgcaacctggagcacgccatg
ggaacgcactgcaacatgttcacaggccagtgtcactgtcaccacggctttgggggtaaa
caatgcaccgagtgtgagcagttccactggggagacccacgggtgcggtgtcaagagtgt
aactgccatccgctgggctcagagatggcccagtgtgaccgaatgacaggggcatgtgaa
tgcagggaaggggcagcgggacggcgctgcgatgaatgcgctcgtggcttcaccggtgac
ttccccaagtgtgtccagtgtcacccgtgcttccagctgtgggatgatgctgtgtgccag
attaaaagagacctggaacacatccagtacaccgtggacaagatccaggagaacgggctc
acgccggtggtcggggatacacgcatcaaagagctggagaagaaactgaagaaggtgaag
gatctaatcaaggcggaggacaacgagaggatccaccagctgattggacagagcatcgat
gacctcagagctgagatcgccctgaccgacgggcgtctgatggccgtcacccgagagctt
aatacgacagcagcagaagaagaggcaatgaaacgcatactgagtgacctagagagagag
ctgagggacctcaacaccactgtggcccgcaaacaacagctactgacagaatacctccat
tcaggatttgcagaccagtttgagaaaattaaggagtactataagcagtcagtggctgcc
gaggacaaatgcaacttcacggtgtccagtcccctcggccctgtggagcagtccaaagaa
acccgcgctcgcactgaagacctgctggacgtcaacaaagacaacttcctccgtgccgtc
gctgctcagaacaaatcattaagcgagctgcagcaaagggcccatgacctggacaagaag
gtgcatcgcctgagtcacaaggtatgcggtggccacaccaatgccagcgccaatggcaca
tgctcagacagcaagtgtggcggcgctggttgccgtgacgaccagggcaatcgcatatgt
ggaggagagggatgcagtgggacagcgagtgccgccatgacagcacagaatctcgccaac
aatgtcaccgacagcctgaaagcggccaacgaggatctgaagaatgtggcaagaaagctc
caggatatagcctctctgacacaggatgtgaagaaccaggcgatgaccacgctggagaaa
gcccagaagaagaaggacaactttgaaaagaacaacaagaagctgaaagatttcatcaag
gagatcaaagacttcctcactgaggagggagcagacccagagagcatagagaaggtggct
cagcaggtcttgtccatcaccctgccggtcaacaagaccactatggacaacatgatcatg
cagataaaggacagcatttccaacctcaccaacgtcgaggacgtcatcaaccaaacctcg
cagcacatcatgaaagccaaggagctgctggacgaagccaaagacgccaagacccgagca
gagggagtgaaggataaagctgataataccaagcaggcactgaatgtgtcagagatggcc
atagagaaagcacaaacagctctggacgaggcccaaaaaaacctgaacagcacgaggaat
gctacagccgaggttgatgagaggctgacacagctcgaggacaagcaaatggacgtcatg
atgcgcttgcaaaacctctccttgggagtggaagcgctaaggaacaagacggagcagaac
aggcagatggctgaggacgctaaagctcgagctgacaacgccacgcagctagcatcctca
ctggagccgagcctcaacaacacggaggaacggtaccgcgagctgcagacaaagatgggc
tctgttgatggtggtctggaaggcataaaccagaaggccaaggatatgaagaaggaggca
gaagacctcctcaatgaagccaaaaaggggatagaacaactgaagaaactggagaaaaag
ttcaggaataacgagcagaagatgcagaagcagcgcatggagctggacgagctaaaggag
aacgctacgatggtgcgagatgagatccgggaacaagtgcagaagtacagtagctgtgtg
tga
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