Larimichthys crocea (large yellow croaker): 104937128
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Entry
104937128 CDS
T04659
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase isoform X2
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00780
Biotin metabolism
lco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
104937128 (hlcs)
Enzymes [BR:
lco01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
104937128 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
104937128 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
104937128 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
104937128 (hlcs)
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Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
104937128
NCBI-ProteinID:
XP_010751581
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Position
XXII:9183123..9200945
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AA seq
881 aa
AA seq
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MLITLCYVYLWVRFHKCYSALIRSSLRRLHSGSFGFSLRSSGSSGPASAAAPAGHRHAED
GHTHAEDRVFLQLGDKTVYVTEPQVLKWSDYCLPLARSPGQPFRAVAQASVDNFSRLGVA
FIEDRLHLDNGLLPSKIVPVLLQESTLSELLEKQCPQTSKPDSLLWFCRRNNEEGVARPL
TCRLSVDHQRLQCRKGSLLLAPELKRRLEERRGSEPLCSKPDLGPTGDSSDHSLGSHHHM
EGHGHHLHLSSCHECLELENSTILSVKYASAENIPDLPDDNSVGLDSGDETLDEVEHDAS
GVLGQSGRFDSKPPNVLVYTGGCQERFQAVRQLLSECINMENNIIYPLLPQQALSDPWLD
NTRLLVLAEEETLNPQLQTRFLTYLSQGGRVLGLSSTLCPAGLCLEVRERRHRQVSQLSF
TREDSTELELNLLASGKVYIRDTQGGGEVELWGELKGDTPHQRDMVIVRVTHEADGGEAV
LCQVHLEISPDSTNLTTEAFDQLKVSNALRYEVLTEILTSLGLSCEINQTPAPSPVHLLA
TSQEAKATFLKWLQTRTNQNGLLTLPKASLRMVSHSELHSEDESLLPGGSLALVTDSPEC
QSSEKFSMETYSKNLKSSLLGNTVLYAEVATSTMDLFEGLNLHLPKDVGLIIVAARQTQG
RGRGRNAWLSPVGCAMFTLGVQVELGSRLGQRIPFLQHLAALAVVEAVRTLPGYEDIDLR
VKWPNDIYYSNLMKLGGVLVTSTVLGSTFHLLIGCGFSVTNTNPTVCINDLVHRHNVQNN
CSLQPLSSAQLIARTVSCLEALISSFQQGGPDAVLPTYYKRWLHSGTRVRLWSEDGLEAD
VVGLDQNGFLQVHSKEQGVVSLEPDGNSFDMMKNLVVTKQR
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcacgctgtgctacgtctacctgtgggtgcgcttccacaagtgctactctgcg
ctgatccgcagcagcctgcgcagactgcacagcggcagcttcggcttcagcctccgctcc
tccggctcctccggcccggcctcagctgctgctccggccggacacagacacgcagaggac
ggacacacacacgcagaggaccgggtcttcctccagctgggggacaagaccgtctacgtg
acagagccgcaggtgctgaagtggtctgactactgtctgcctctggctcgtagccccggc
cagccgttcagggccgtggctcaggcgagcgtcgataacttcagtcgtctcggggtggct
tttatcgaagatcgccttcacctggacaacggacttctgccttcaaagatagtccctgtc
ctcctccaagaatccaccctcagtgagctgttggagaagcagtgtccacagacgtcaaag
cccgactcgttgctctggttctgccgcagaaacaatgaagaaggcgtcgctcggcctctg
acgtgtcgcctgtcagtcgatcatcagcgcctgcagtgccgtaaaggcagcctgctcctc
gccccggagctcaagaggaggctcgaggagcgacgagggtcggagccgctctgcagcaag
ccggatctgggacccaccggtgactcgtcggaccactctttgggcagtcatcaccacatg
gagggccatggacaccacctccacctgtccagctgccacgagtgcctggagctggagaac
agcaccatcctgtctgtgaaatacgcctccgctgagaacattccagatcttcctgacgat
aactcggtcgggctggacagcggggacgagactctggatgaggtcgaacatgatgccagc
ggggttttgggtcaaagcggcagattcgatagcaaaccaccaaatgttctggtgtacacg
ggcggctgtcaggagcgttttcaggccgtccggcagcttttgtccgagtgtataaacatg
gagaacaacatcatatatcccctcttaccacagcaggctctgagcgacccctggctggat
aacaccaggctcctggtgctggcagaggaggaaaccctgaaccctcagctccagacccgc
tttctcacctacctgagtcagggcggcagagtgctgggcctgagctccaccctgtgtcct
gcaggcctctgtctggaggtcagagagaggcgacaccggcaggtcagccagctgagcttc
acccgggaggacagcaccgagctggaactgaacctgttggcgagcgggaaggtttacatc
agggacactcagggtggaggggaggtggagctgtggggcgagctgaaaggagacacgccc
catcagagagacatggtcatagtcagggtgacccacgaggcggacggaggggaggccgtc
ctctgtcaggtccacctggaaatctctcctgactccacgaatttgaccacagaagcgttc
gatcagctgaaagtcagcaacgcgctgcgttacgaagtcctgacggagatcctgacctct
ctgggcctcagctgtgagataaaccagactccagcaccgagcccagtccacctgctcgcc
acctctcaggaggccaaggccacattcctgaaatggctgcagacacgtacgaatcagaac
ggcctccttacgttgcccaaagcttccctcaggatggtgtcgcattcagagctgcattca
gaggacgaatctctgctgcccggcggctctctggctctggtcactgattctccagagtgc
cagagctcggagaagttcagcatggaaacgtacagcaagaacctgaagagcagcctgctg
gggaacaccgtgctgtacgccgaggtcgccacgtctaccatggacctgtttgaagggttg
aatctgcacttaccgaaggacgtcggcttaataatcgtagctgctcgtcagactcagggc
agaggtcggggcaggaacgcctggctcagccctgtcggctgtgccatgttcactctgggg
gtccaggtggagctgggctccaggctcgggcagaggattcccttcctgcagcacctggct
gctctggcagtggtggaggctgttcgcacacttcctggatacgaggacatcgacctgagg
gtgaagtggcccaatgacatctactacagcaacctcatgaagctcggaggagtgctggtg
acttccactgtgcttggatcaacatttcatctgctcataggctgtggcttcagcgtgacc
aacacaaacccgacagtgtgcatcaacgatctggtccatcggcacaacgtgcagaataac
tgcagcctgcagccgctcagctccgctcagctcatcgctcggactgtcagctgcctcgag
gcgctgatcagcagctttcagcagggaggcccggacgccgtcctgcccacctactacaag
agatggctccacagcgggactcgggtgcgtctctggagcgaggacggactcgaggctgac
gtggttggtctggaccaaaacggcttcctccaggtgcacagtaaggagcagggcgtggtc
tctctggagcccgacgggaactccttcgacatgatgaagaacctcgtggtcaccaaacag
cgttaa
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