Lysobacter capsici: LC55x_0185
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Entry
LC55x_0185 CDS
T04162
Name
(GenBank) glycosyl hydrolase family 20, catalytic domain protein
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
lcp
Lysobacter capsici
Pathway
lcp00511
Other glycan degradation
lcp00520
Amino sugar and nucleotide sugar metabolism
lcp00600
Sphingolipid metabolism
lcp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
LC55x_0185
09103 Lipid metabolism
00600 Sphingolipid metabolism
LC55x_0185
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
LC55x_0185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lcp03110
]
LC55x_0185
Enzymes [BR:
lcp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
LC55x_0185
Chaperones and folding catalysts [BR:
lcp03110
]
Intramolecular chaperones
Others
LC55x_0185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glyco_hydro_20b
CBM_6
CHB_HEX_C_1
DUF4995
Fn3_assoc
Motif
Other DBs
NCBI-ProteinID:
ALN83490
UniProt:
A0A0S2FJ28
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All DBs
Position
complement(192488..194905)
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AA seq
805 aa
AA seq
DB search
MKTRTTRSLLAAAALAAALTACHSAAPREAAAHVQAAHDGEAASAARDTDTVAAHRTAII
PRPLKTQAQRGQFEFGANTPVQVHAGHAGERRVADYFAAKVRALRGFAPSIAETQTESKN
ARDAIALSLEPDLAIGEEAYVLDIQSDGVRIRARTEAGLFYGAVSLWQLLTADGGQGATR
IAAQRIEDAPAYRWRGVMLDVARHFRGVDEVKSVIDQMALHKLNTFHWHLTDDQGWRIEI
KQYPRLTQVGGCRIPAGANGRDAQGKPQPYCGYYTQEQIRDVVAYAAARHITVVPEIEMP
GHAQAAIAAYPNLGVTDVVRKAPRVSPDWGVHTYLFGVDDSTFDFLENVLDEVAGLFPSK
YIHIGGDEAAKDQWIASKKVQARIKSLGLKDEMALQSWFVGRIGQHLQTHDRILLGWDEI
LEGGRLPANATVMSWRGTAGAVEAAREGHDVIVAPDRQLYLDYVQSDRDDEPPGRFPAST
LRDFYDFSIVPAELTAQQSKHVIGAQANLWSEHRRSFDRIQTTLYPRLDALAEVVWSPPS
SRDWNDFQQRLAPQLARYRAQDVLVSDVAYAVSFKVIDGADGQPQLSLSNQAGFGEIRYR
SDGGEPDPASPRYRQPLPATPPLDLVATPFFDGRPLAAPRRFSARDLAGLSRRTSAGLRP
CREGYNLRLEDDAARDGGRDGERAALTVNLIDPCWIYPAAALDGVGAIEVQVGQLPYNFQ
LWHDTDKIVTRKAVQGGALEVRLDDCKSAPIARLPLAAAKRSDGITTLRARLPAHSGRHD
LCFVFASGAHDPLWALDAVTLHPPE
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgcgcacgacccgcagcctgctcgccgccgccgctctggccgccgccttgacc
gcgtgccacagcgccgcgccacgcgaggccgccgcgcatgtgcaggccgcgcacgacggc
gaagcggccagcgcagcgcgtgacaccgacactgtcgccgcccatcgcaccgcgatcatc
ccgcgtccgctcaagacccaggcccagcgcggccagttcgaattcggcgcgaacacgcct
gtgcaagtgcatgccggacacgccggcgaacgtcgcgtcgccgattacttcgccgccaag
gtgcgggcgctgcgcggcttcgcgccgtccatagccgaaactcaaaccgaatccaagaac
gcgcgcgacgcgatcgcgctgagcctcgagccagatcttgcgatcggcgaggaagcctat
gtgctcgacatccagtccgacggcgtgcgcatccgcgcgcgcaccgaagccggcctgttc
tacggcgcggtcagcctgtggcagttgctcaccgccgacggcggccagggcgcgacccgg
atcgcggcgcagcgcatcgaagacgcgccggcgtatcggtggcgcggcgtgatgctggac
gtggcgcggcatttccgcggcgtcgacgaggtcaagtcggtcatcgaccagatggcgctg
cacaagctcaacaccttccactggcatctcaccgacgatcagggctggcgcatcgagatc
aagcaatacccgcgcctgacccaggtcggcggctgccgcattcccgccggcgccaacggc
cgcgatgcgcagggcaagccgcaaccgtattgcggttactacacccaggaacagatccgc
gacgtcgtcgcctacgccgccgcgcgccacatcaccgtggtgccggaaatcgagatgccc
gggcatgcgcaggccgcgatcgcggcgtatccgaacctcggcgtgaccgacgtcgtgcgc
aaggcgccgcgggtgtcgccggactggggcgtgcatacctatctgttcggcgtcgatgat
tcgaccttcgacttcctggaaaacgtgctcgacgaagtcgccgggttgtttccgtcgaag
tacatccacatcggcggcgacgaagcggccaaggaccaatggattgcgtccaaaaaggtg
caagccaggatcaagtcgctcggcctcaaggacgagatggccttgcagagctggttcgtc
ggccgcatcggccagcatctgcagacgcacgaccgcatcctgctgggctgggacgaaatc
ctcgaaggcggccgcctgccggccaacgcgacggtgatgtcctggcgcggcaccgccggc
gcggtcgaggccgcgcgcgaaggccatgatgtgatcgtcgcgcccgatcggcagctgtac
ctggactacgtacagagcgatcgcgacgacgagccgcccggacgcttcccagccagcacc
ctgcgcgacttctacgatttctcgatcgtgccggccgaactcaccgcgcagcagagcaag
cacgtgatcggcgcgcaggccaatctgtggagcgagcaccggcgcagcttcgatcgcatc
cagaccacgctgtatccgcgcctggatgccttggccgaagtggtgtggtcgccgccgtcc
agccgcgactggaacgacttccagcagcgcctggcgccgcagctcgcgcgttatcgcgcc
caggacgtattggtcagcgatgtcgcgtatgcggtgtcgttcaaggtcatcgatggcgcc
gacggacagccgcaactgagcctgtcgaaccaggccggcttcggcgagatccgctaccgc
agcgacggcggcgagcccgacccggcgtcgccgcgttatcgacagccgctgccggcgacg
ccgccgctcgacctcgtcgccaccccatttttcgacggccgaccgctggccgcgccgcgc
cgtttcagcgcccgcgatctggccggcctgagccgtcgcaccagcgccggcctgcggcct
tgccgcgagggctacaacctgcgcctggaggacgacgccgcgcgcgatggcggccgcgac
ggcgagcgcgccgcgctgaccgtgaacctgatcgatccgtgctggatctacccggccgcc
gcgctcgacggcgtcggcgcgatcgaagtccaggtcggccagctgccgtacaacttccag
ctctggcacgacaccgacaagatcgtgacccgcaaggcggtgcagggcggcgcgctggaa
gtccgcctcgacgattgcaagagcgcaccgatcgcgcgcttgccgctggcggcggccaaa
cgctccgacggcatcaccacgctgcgcgccagactgcctgcgcacagcggtcgccacgac
ctgtgcttcgtgttcgccagcggcgcgcacgacccgctgtgggcgctcgatgcggtgacc
ctgcacccgccggagtga
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