Lysobacter capsici: LC55x_5233
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Entry
LC55x_5233 CDS
T04162
Name
(GenBank) sugar (and other) transporter family protein
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_5233
01504 Antimicrobial resistance genes [BR:
lcp01504
]
LC55x_5233
Transporters [BR:
lcp02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
LC55x_5233
Antimicrobial resistance genes [BR:
lcp01504
]
Gene variants
Tetracycline resistance genes
Transporters
LC55x_5233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_1_like
MFS_4
TRI12
DUF2208
Motif
Other DBs
NCBI-ProteinID:
ALN88480
LinkDB
All DBs
Position
complement(5818512..5819783)
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AA seq
423 aa
AA seq
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MTTSSAPAPGARRAALVFIFITVLIDVLSFGLIIPVLPHLIERFVDGDTARAAYWVGLFG
TVFALIQFVFSPIQGSLSDRYGRRPVILLSCLGLGLDFVLMAVVDTLPLLLIGRIISGIT
AASFTTANAYIADITPPEQRAKSFGMIGAAFGVGFVVGPLIGAYLGEVDLRLPFWFAAGL
ALLNFFYGLFVLPESLPKEKRTARFDWAHANPFGSLMLLKRYPQVFGLAAVVFIANMAHY
VYPSIFVLFADYQYHWGLREVGWVLLVVGVCNIIVNVGLIGRVVARLGERRTLLLGLGCG
VVGFVIYGLADVGTLFLIGLPISALWAMAAPATQALVTRQVGPSEQGRIQGALMSLISLA
GVLGPALFAGSFGYFIGKTSPIHLPGAPWFIAAILLCIGLLIAWRYARVPATAPAAAEAE
AAV
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgtcttccgctcccgccccgggcgcgcgtcgagctgcgctcgtcttcattttc
atcaccgtgctgatcgacgtgctgtcgttcggcctgatcattccggtgctgccgcacctg
atcgagcgcttcgtcgacggcgacaccgcgcgcgcggcctattgggtcggtctgttcggc
acggtgttcgcgctgatccagttcgtgttctcgccgatccagggcagcctgtcggaccgc
tacggccggcgtccggtgatcctgctgtcgtgcctgggcctgggcctggacttcgtgctg
atggcggtggtcgacaccctgccgctgctgctgatcggccggatcatttccggcatcacc
gcggccagcttcaccaccgccaacgcctacatcgccgacatcaccccgcccgagcagcgc
gccaagagcttcggcatgatcggcgcggcgttcggcgtgggcttcgtggtcgggccgctg
atcggcgcctacctgggcgaagtcgacctgcgtctgccgttctggttcgccgccgggctg
gcgctgctgaacttcttctacggcctgttcgtgctgcccgaatcgctgccgaaggaaaag
cgcaccgcgcgcttcgactgggcgcacgccaacccgttcggttcgctgatgctgctcaag
cgctacccgcaggtgttcggcctggccgcggtggtgttcatcgccaacatggcgcactac
gtgtatccgagcatcttcgtgctgttcgccgattaccaataccactggggtctgcgtgaa
gtcggctgggtgctgctggtggtgggcgtgtgcaacatcatcgtcaacgtcggtttgatc
gggcgcgtggtggccagactcggcgagcgccgcaccttgctgctcggtctgggctgcggc
gtggtcggtttcgtcatctatggtctggccgatgtcggcacgctgttcctgatcggcctg
ccgatcagcgcgctgtgggcgatggccgcgccggcgacccaggcgctggtcacccgtcag
gtcggcccgagcgagcaaggccgcatccagggcgcgctgatgagcctgatctcgctggcc
ggcgtgctcggcccggcgctgttcgccggcagcttcggttacttcatcggcaagacctcg
ccgatccatctgccgggcgcgccgtggttcatcgccgcgatcctgctgtgcatcggcctg
ctgatcgcgtggcgttacgcgcgcgtgccggcgacggcgcccgcggcggcggaagccgaa
gcggccgtctga
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