Loigolactobacillus coryniformis subsp. torquens: LC20004_02920
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Entry
LC20004_02920 CDS
T05341
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
lcy
Loigolactobacillus coryniformis subsp. torquens
Pathway
lcy00190
Oxidative phosphorylation
lcy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcy00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
LC20004_02920
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LC20004_02920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcy03019
]
LC20004_02920
Enzymes [BR:
lcy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
LC20004_02920
Messenger RNA biogenesis [BR:
lcy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LC20004_02920
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
ATO42930
UniProt:
A0A2D1KLB4
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All DBs
Position
630925..633057
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AA seq
710 aa
AA seq
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MNFAKPEYFVNRELSWVDFDDRVLEEARDKNNPLLERVRFLGITQSNLDEFFMVRVASLR
KMQAVAYSKPDAAGMSPTTQLAALSAKIHPLVEKQYSTWTRSLLPQLEKVGINLLDYSQL
SKKQLSFCSQYFHQVLYPVLTPLAVDASRPFPFIGNNTLNLALRLVKADVAEKKDRRFAM
VQVPDVFPRVVTLPGENQFILLEEVIKPFIGELFTGFKVKEVQTFRVIRDMDFDVAEEDA
SDLMKEIVHQLAMREHTKVMRLELAAETSKTLRKRLIKALAVHEADVYDIKGPIDLTVLS
KLVKAVKNHPELLYQPFKAYTQPALRQTDLFAAIRQQDLFLHHPYDSFDPVVQLIKQAAN
DPATLAIKMTLYRVSSDSPIIQYLGAAAQNGKQVTVLVELKARFDEENNVHWATELEKKG
CHVIYGLVGLKTHCKLLLIVRRESDGIRRYMHMATGNYNDVTARLYTDMGLFTADPKMGV
DASNIFNMLSGFSEPDHFAELNIAPLTLRKFLNARFDDEIANAKAGKKALIRMKMNSLSD
KQMIEKIYEAAAAGVKVDLIIRGICCLQVGIPGISENVTVHSIVGRFLEHSRIYYFYAGG
EEKLYLSSADLMNRNLSRRVELLFPILQPNIKAQIVQIYELMWQDNLKTRVLQADGSYQK
VDRRGLAPLDVQAHLVTVANTEQKATVTKPATPPTHFTPMKKPWSPVDDD
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgctaagccggaatattttgttaatcgtgaattaagctgggtcgattttgat
gatcgcgtactggaagaagcccgcgacaaaaacaatccgttgttggaacgggtccgcttt
ctcggaatcacccaaagtaatttagacgaatttttcatggtgcgggtagcttcactgcgg
aaaatgcaagcagtggcttattccaaacccgatgctgccgggatgtcaccgaccacgcag
ttagcggcgctaagtgccaaaattcatcccctcgttgaaaaacagtattcgacgtggacg
cggtcattgttacctcaattggaaaaagtgggcatcaatttattagactatagccaactg
tcaaaaaaacaattgagtttttgtagtcagtattttcatcaagtgctctatcccgttttg
acgccgctagccgtggatgcatcgcggccgttcccgtttattggcaataatacgctgaat
ttagcgctacgtttagttaaggctgatgttgcagagaaaaaagatcgccgttttgccatg
gtccaagtgcccgatgtttttccgcgggtggttactttacctggcgaaaatcaatttatt
ctgttggaagaagtgatcaagccatttatcggcgaattatttactggcttcaaagttaaa
gaagtccagaccttccgcgtgatccgtgatatggattttgatgtggccgaagaagatgct
tctgatttaatgaaagaaatcgtccatcagctggcgatgcgtgagcatacgaaagtgatg
cgcttagagctagcggctgaaactagcaaaacattgcgtaaacgcttgatcaaggcgttg
gcagtccatgaagccgatgtgtacgatatcaaaggtcccatcgatttgaccgttttaagt
aagttagttaaagctgttaaaaatcatcctgaattattgtatcaaccatttaaagcttac
acgcagccggcgttgcggcaaaccgatctgtttgcggcgattcgccaacaagatctgttt
ctgcatcacccctatgatagctttgatccggtggtgcagctgatcaagcaagctgccaat
gatccagcaacgctagctattaagatgacgctgtaccgcgtgtccagcgattcgccaatc
attcagtaccttggggcggcggcacaaaatggtaagcaggtcaccgtactagttgaatta
aaggcccgttttgacgaagagaacaacgtgcattgggccaccgaattggaaaagaaaggc
tgccacgtgatttacggtttagtcggtttgaaaacgcattgtaaattactgttgatcgtt
cgtcgcgaaagtgatggcattcgccgatacatgcatatggccaccggtaattataatgat
gtgactgcacgcttgtacacggatatgggtttatttacagctgatccgaaaatgggcgtc
gatgcttcgaatatttttaatatgctgtcaggtttttctgaacccgatcattttgctgaa
ttaaacattgcaccgctgacgttgcgcaagtttttgaatgcgcgctttgacgatgaaatt
gccaacgccaaggccggtaaaaaagcgctgattcggatgaagatgaactctttgtcggac
aagcaaatgattgaaaaaatctacgaagccgctgccgccggagttaaagttgatttgatc
attcgtggcatctgttgtttgcaggttgggatacctggtatcagtgagaacgtaacggtt
cattcgattgtcggccgtttcttggagcacagtcgaatctactatttttatgcgggtggc
gaggaaaaattatacctttcatcagccgatttaatgaatcgtaatctcagtcgacgggtc
gagttgttatttccaattctgcaacctaatattaaagcacaaatcgtacaaatttatgag
ttaatgtggcaagacaacttaaaaacaagagttctgcaagccgatggcagttatcaaaaa
gtcgatcggcgaggattagcgccgttggatgtgcaggcgcatttagtaacggtggcgaat
actgaacaaaaggcgacagtcactaagccagcaacaccaccgacgcattttacgccaatg
aaaaagccatggtcgccggtagatgacgattag
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